| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1306 |
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| Symbol | mnmA |
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| ID | 8332641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1482573 |
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| End bp | 1483649 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644954453 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_003112072 |
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| Protein GI | 256390508 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGTCT TGGCGGCGAT GTCCGGTGGT GTCGACTCGG CGGTGGCTGC CGCCCGGGTG
AGGGATGCGG GTCACGAGGT GACCGGCGTC CATCTGGCGT TGTCCCGGAA CCGCCAAGCC
CTGCGCGACG GCGCGCGCGG CTGCTGCACG ATCGAGGACT CCCACGACGC CCGGCGCGCC
GCGGACATGC TCGGCATCCC CTTCTACATC TGGGACATGT CCGACCGCTT CCACGAGGAC
GTGATCGACG ACTTCGTCGC CGAGTACCAG GCCGGCCGCA CCCCGAATCC GTGCCTGCGC
TGCAACGAGA AGATCAAGTT CGCGGCGGTC CTGGACAAGG CGCGGGCGCT GGGCTTCGAC
GTGGTCGCCA CCGGCCACTA CGCGCGCCTG CTCGACGGCC CGCACGGCCC GGAGCTGCAC
CGCGCCGCCG ACCCGGCGAA GGACCAGTCC TACGTCCTGG GCGTCCTGGA CGCCGACCAG
CTGGCGCACT CGCTGTTCCC GCTCGGCGAC GACACCAAGC CCGCGGTGCG CGCCGAGGCG
GCCGAGCGCG GTCTGTACGT CGCCAAGAAG CCCGACAGCC ACGACGTCTG CTTCATCCCC
GACGGGGACA CCAAGGCCTA TCTCGCCAAG ACGCTGGGCA CCAGCTCCGG TCCGATCGTG
GACAGCGAGG GGCGGCGGGT CGGCGAGCAC GACGGCGCCT GGGGATTCAC CATCGGCCAG
CGCCGCGGTC TGCGGATCGG CGACCCGGCC GGCGATGGTC GGCCGCGCTA TGTGCTCGAC
ATCTCGCCGG TCACCAACAC GGTGACGGTC GGGACCGCCG AGGAGTTGGA CGTCACCGGG
CTGTCCGGGA TCAAGTTGCG GTGGTGCGGA CCGGAGTTCA TTGGTCGGAT CGAGTGTCAC
GCTCAATTGC GTGCGCACGG CGAGCCGGTG CCCGCGACGG CTGAGCGCAG CGGTCCGGAT
TCGATTGATG TCGTGCTGCA CGAGCCGGTC CGTGGCCTGG CTCCGGGGCA GGCCGCAGTG
CTTTATGACG GGACTCGGGT GATCGGATCC GCCACGGTGG CGCAGACCTC GCGGTGA
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| Protein sequence | MRVLAAMSGG VDSAVAAARV RDAGHEVTGV HLALSRNRQA LRDGARGCCT IEDSHDARRA
ADMLGIPFYI WDMSDRFHED VIDDFVAEYQ AGRTPNPCLR CNEKIKFAAV LDKARALGFD
VVATGHYARL LDGPHGPELH RAADPAKDQS YVLGVLDADQ LAHSLFPLGD DTKPAVRAEA
AERGLYVAKK PDSHDVCFIP DGDTKAYLAK TLGTSSGPIV DSEGRRVGEH DGAWGFTIGQ
RRGLRIGDPA GDGRPRYVLD ISPVTNTVTV GTAEELDVTG LSGIKLRWCG PEFIGRIECH
AQLRAHGEPV PATAERSGPD SIDVVLHEPV RGLAPGQAAV LYDGTRVIGS ATVAQTSR
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