Gene Caci_1302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1302 
Symbol 
ID8332637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1478848 
End bp1480020 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content75% 
IMG OID644954449 
Productaminotransferase class V 
Protein accessionYP_003112068 
Protein GI256390504 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTAT ATCTGGATCA CGCCGCGACG ACCCCCATGC TCCCGGCCGC CGTCGACGCG 
ATGACGGCAC GGCTGGGCGT GACGGGCAAC GCCAACTCCC TGCACGCCGC CGGCCGCGCC
GCGCGGCGCG TGGTGGAGGA GTCCCGCGAG CAGATCGCGG AGGCGCTGGG CGCCCGGCCC
TCGGAGGTCG TCTTCACCTC CGGCGGCACC GAGAGCGACA ACCTGGCGGT CAAGGGCCTG
TACTGGGCCC GCCGCGACGC CGACCCCCGC CGCCGCCGGG TGCTGGCGCC CAGGATCGAG
CACCACGCGG TCCTGGACCC GCTGAGCTGG CTCGAGGAGC ACGAGGGCGC CGAGATCGAC
TGGCTGCCGG TGGACAGCCT CGGGCGGGTG CAGCCCGACG CGCTGCGCGC CGCGATCGAG
CGCGACCCGG ACTCGGTGGC GCTGGCCACG GTGATGTGGG CGAACAACGA GGTCGGCACG
GTCCAGCCGG TCAAGGAACT GGCCGGGGTC GCCCACGAGT TCGGCATCCC GATGCACTCC
GACGCCGTGC AGGCGGTCGG TGCGCTGGAC GTGGACTGGA GCGCCAGCGG CCTGTCAGCG
ATGACCTTCA CCGCCCACAA GATCGGCGGT CCGATCGGCG TCGGCGCGCT GCTCCTGGGC
CGCAAGACCC AGGCGGTCCC GGTGCTGCAC GGCGGCGGCC AGGAGCGCGA CGTCCGCTCC
GGAACCCTGG ACACCCCGGC CATCGCCGGC TTCGCCGCCG CGGTGGTGGA GACGGTGAAG
GACCGCGAGG CCAAAGCCGA GACCCTGACC GCGCTGCGCG ACGAGCTGGT CGCCCGGGTC
CAGGCCGAGA TCCCGGACGC GGTCGTGAAC GGCGACCGCG GCGCCGGCAC CGGCCTGCCC
GGCATCGCGA ACATGACCTT CCCCGGCTGC GAGGGCGACT CGCTGCTGAT GCTGCTGGAC
GCCCGCGGCG TGGAGTGCTC GACCGGCTCG GCGTGCTCGG CCGGCGTCGC GCAGCCCAGC
CACGTCCTGC TGGCGATGGG CGTCGACGGC GAGCCGGCGC GCGGATCGCT GCGCTTCTCC
CTCGGGCACA CCTCGACGAA GGCTGACGTG GACGCGCTGG CGGAGGCGAT CGGGCCGGTG
GTCGCGCGGG CGCGGGCAGC CGGGCTGAGC TGA
 
Protein sequence
MAVYLDHAAT TPMLPAAVDA MTARLGVTGN ANSLHAAGRA ARRVVEESRE QIAEALGARP 
SEVVFTSGGT ESDNLAVKGL YWARRDADPR RRRVLAPRIE HHAVLDPLSW LEEHEGAEID
WLPVDSLGRV QPDALRAAIE RDPDSVALAT VMWANNEVGT VQPVKELAGV AHEFGIPMHS
DAVQAVGALD VDWSASGLSA MTFTAHKIGG PIGVGALLLG RKTQAVPVLH GGGQERDVRS
GTLDTPAIAG FAAAVVETVK DREAKAETLT ALRDELVARV QAEIPDAVVN GDRGAGTGLP
GIANMTFPGC EGDSLLMLLD ARGVECSTGS ACSAGVAQPS HVLLAMGVDG EPARGSLRFS
LGHTSTKADV DALAEAIGPV VARARAAGLS