Gene Caci_1301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1301 
Symbol 
ID8332636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1477631 
End bp1478707 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content75% 
IMG OID644954448 
Producthypothetical protein 
Protein accessionYP_003112067 
Protein GI256390503 
COG category[S] Function unknown 
COG ID[COG2845] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGAGG AGAACGAGCG CGAACCCGTC ACGACCGCGC GCCAGGCGGG TCGGGTGATC 
CGCATCGCCC TGATCACCGC GCTGCTGCTG AACACCGCCG GCGTCGTGCG CGCCGGGCTC
GGCATGGCGC CCGGACCGAC CCGCGATCTC CTGCTGGACA TCGCGCGTCC CCTGGACAGC
ATCGCCGGCG CCCTGGACCT GAACCGCCCG CGCACCTCGC TGGACGCCAT GCTCGGCCAC
CGCGACGGCC TCACCGACGA CGGTCACCGG ACCCGTCTGG AGCAGGACGC CGACCGGCAG
CAGCCGGTCG CCGAGCCGCC GCCTTCGGGA ACACCGTCCG CGCCGACCGT GCCCGAAGGT
CCAGGCGGTC CCGCCGCCGC TCCCGTCCCC GCAGGCGACC CCGAGCCCCG CCTCGCCCCG
GTCGGCGCCG CGGTCCGCCA CGCCACCGCC GCCGACCCGC TGCGCGTCCT GGTCACCGGC
GACTCGCTCT CGGACTTCGA CGGCCAGCAA CTGGCGCGCC TGGTCGCCTC CGAGCACCTC
CCGGCGAAGG TGCGCGTGCA GGCCCGCAAC GGCACCGGGC TGACCCAGCC GTCGGTCTTC
GACTGGTCGG ACGAGGCGGC GCAGGACGCC GTCGCCTTCG ACCCGGACGT GGTGGTCATG
GTCCTCGGCG CGAACGACGG CTGGCCGCTG CGCGGCGCCG ACGTCGGGTC GAACGCCTGG
GACGAGGAGT ACTCGCGCCG GGTGGAGGCC GTCACCCGCG ACTTCATCGC CGGCGACCCG
CAACGCCGCG TCTACTGGGT CGGCCCGCCG GTCCCGCGCT CGGCGCCCTG GATCCACATC
TTCGCGCGCA TCAACGACGC GGTGCGCGCG GCCGTGCCGA ACGTCCCCGG GCTGCGCTAT
GTGGACGTCG CCGGACCGAC CTCCGACCAC GGCCGCTACA CGGACTACCT GACCGACGCC
GCCGGGAACC GGATCCTGGC GCGCCAGCAC GACGGCATCC ACTTCAGCTT CCCGGGCTCG
GTCTTCCCGG CGCGGATCAT CCTGGCCTCG CTGCTGGGGG AATACACACT GGGCTGA
 
Protein sequence
MSEENEREPV TTARQAGRVI RIALITALLL NTAGVVRAGL GMAPGPTRDL LLDIARPLDS 
IAGALDLNRP RTSLDAMLGH RDGLTDDGHR TRLEQDADRQ QPVAEPPPSG TPSAPTVPEG
PGGPAAAPVP AGDPEPRLAP VGAAVRHATA ADPLRVLVTG DSLSDFDGQQ LARLVASEHL
PAKVRVQARN GTGLTQPSVF DWSDEAAQDA VAFDPDVVVM VLGANDGWPL RGADVGSNAW
DEEYSRRVEA VTRDFIAGDP QRRVYWVGPP VPRSAPWIHI FARINDAVRA AVPNVPGLRY
VDVAGPTSDH GRYTDYLTDA AGNRILARQH DGIHFSFPGS VFPARIILAS LLGEYTLG