Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1292 |
Symbol | |
ID | 8332627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1467708 |
End bp | 1468766 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644954439 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_003112058 |
Protein GI | 256390494 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00715286 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACGG AAACCACGGC GCAGACGTCC GAGACCTCCG CGGTGGAACC GGACGCGCTG CTGCAGGTCA GCAATCTGGT CAAGCACTTC CCGATCCGGC GCGGCCTGCT GCAGCGCCAG GTCGGCGCGG TGCAGGCGGT GGACGGGATC AGCTTCTCCG TCCGCGCCGG GGAGACCCTC GGCCTGGTCG GCGAGTCCGG CTGCGGCAAG TCCACGACCG GCAAGCTGCT GGCCCGCCTG GACGAGCCCA CCGCCGGGCA GATCAAGTTC GACGGGCGCG ACATCGCGCA CATGAGCCAG GGCCAGCTGC GGCCGCTGCG CCGGGACATC CAGATGGTGT TCCAGGACCC GCAGTCCTCG CTGAACCCGC GGCACACCGT CGGCACCATC GTCGGCGCGC CCTTCCACAT CCAGGGCATC CAGACCCCGA ACGGCGTGAA GAAGGCCGTC CAGGACCTGC TGTCCCTGGT GGGCCTGTCC CCGGAGCACT ACAACCGCTA CCCGCACGAG TTCTCCGGCG GCCAGCGCCA GCGCATCGGC ATCGCCCGGG CCCTGGCCCT CAAGCCCAAA CTGGTCATCG CCGACGAGCC GGTCTCCGCC CTCGACGTGT CGATCCAGGC GCAGGTGATG AACCTCCTCG AGGACCTGCA GAACGAACTG AACCTGGCCT ACGTCTTCAT CGCCCACGAC CTGTCGGTGG TCCGCCACAT CTCCGACCGC GTCGCGGTGA TGTACCTCGG CAAGATCGTC GAGATCGCCG ACCAGGCCGA CATGTACACC AAGCCGCACC ACCCCTACAC CACCGCCCTC CTGTCAGCGG TCCCCATCCC GGACCCCGAC CGCAAGGACG GCAAAGCCGA AGGACAGGTG GAACGCATCC GCCTGGTCGG CGACGTCCCC TCCCCGATCA ACCCCCCAGC CGGCTGCCGC TTCAACACCC GCTGCTGGAA GGCCCAGGAC GTCTGCCGCA CCCAGGAACC CCCCCTCCTG CAGATCGGCC CGCCCTCCGC AGCCGGCTAC GCACACCAGG TGGCCTGCCA CTTCCCGGAG AACGTGTAA
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Protein sequence | MSTETTAQTS ETSAVEPDAL LQVSNLVKHF PIRRGLLQRQ VGAVQAVDGI SFSVRAGETL GLVGESGCGK STTGKLLARL DEPTAGQIKF DGRDIAHMSQ GQLRPLRRDI QMVFQDPQSS LNPRHTVGTI VGAPFHIQGI QTPNGVKKAV QDLLSLVGLS PEHYNRYPHE FSGGQRQRIG IARALALKPK LVIADEPVSA LDVSIQAQVM NLLEDLQNEL NLAYVFIAHD LSVVRHISDR VAVMYLGKIV EIADQADMYT KPHHPYTTAL LSAVPIPDPD RKDGKAEGQV ERIRLVGDVP SPINPPAGCR FNTRCWKAQD VCRTQEPPLL QIGPPSAAGY AHQVACHFPE NV
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