| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1289 |
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| Symbol | |
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| ID | 8332624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1463641 |
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| End bp | 1465473 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644954436 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003112055 |
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| Protein GI | 256390491 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.172232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCT CCAAGCTGTT GGGAGGCGTC GCGCTCGCCG CGTGCGTCGC CCTGGCAGCC
TCGGCGTGCT CCAGCTCGAA GACGAACTCC GGCTCGAGCG CGCCGACGAC TGCCGTCACC
ACCCTGCCTT CGGGCAACAC CAGCGCCGCC ACCGGCTTCA ACGCCGCCGT GACCGGCATC
GTCCGCCCGA CAGACGCCGA GGGCGGCACC ATGACACTGG TGGACCGCTC CGACTTCGAC
TCGCTCGACC CGGGCAACAC CTACGACGCC TTCTCCTGGT CGATCATCGG CGACTGGGCT
CGTCCGCTGA TGACCTACGC CCAGCAGCCC GGCAACGCCG GCGCCAAGGT CGTGCCGGAC
CTGGCCGAGG GTCCCGGTGT CGTGTCCAAC AACGGCATGA CCTGGACCTA CAAGATCAAG
CCGGGCGTGA AGTACCAGGA CGGCTCCGTG GTCACCTCCG CGGACGTCAA GTACGCGATC
GAGCGCTCCA ACTGGGGCCA GGACACCCTG GTGAACGGTC CGGCGTACCT GCCGAACTTC
ATCCAGGACA CCACGAAGTA CGCCGGTCCC TACAAGGACA AGAACCCGAA CGACGGCGTC
TCCGGCATCA CCACGCCGGA CAACCAGACC ATCGTGTTCA ACCTGACCTC GCCGTTCTCG
GACTTCGACT ACCTGATGGC GCTCCCGGGC TCGGCCCCGG TGCCGCGGGC GAAGGACACC
GGCGCGGACT ACTTCAAGAC GCTGCTGTCG ACCGGTCAGT ACAAGGTCGA CAACTACCAG
GTCGGCAACG AGCTGGACCT GTCGCCGAAC CCGAACTTCG ACAAGTCCAC GGACCCGGAC
AAGCTGCACG TCGTCCGCGC CTCGAAGATC GTGGTCAAGC TCAAGCAGGA CAAGGCGACG
ATCGACGACA CGCTGTTCGA CGGCTCGGCC AACGCCGACC TGACCGGCGT GGGCGTGCAG
CCGGCCACCC AGAGCAAGAT CCTGGGCGAC CCGAAGCTCA AGGCCGACTC GGACTCCGCG
TACGCGAACT CCACTGAGTA CTTCGCGATC AACGCGACTC AGAAGCCGTT CGACAACGTG
AACTGCCGCC AGGCCATCGA GTGGATCATC GACAAGGCCA CGCTGCAGAC CGAGGCCGGC
GGCTCGCAGG GCGGCGGCGA CATCGCCAGC ACCATCGACC CGCCGACGAT CCCGGGCTGG
AAGGCCGGCG ACCAGTACCT GACGGCGGGC AACAAGGGCG ACGCCACCAA GGCGAAGGCC
TCGCTGGCCC AGTGCAAGAC CGCTGAGCCG GACGCCTTCA ACGCCGACGG CAGCATCAAG
GACACCTTCG AGATCATGAC TCGCGACAAC TCCACCAAGG AGGCGACCAT GGTCCAGACG
ACGCAGACCA ACCTGAAGTC GATCGGCATC AACACCACCA TCGACACCAA GCCGTTCGAC
AAGTACAACT CGCAGTTCGC CGGCAACAAG ACGTACGTGG ACCAGCACAA GGTCGCCATC
AGCTTCATGA AGTGGGGCGC CGACTTCCCG TCGGGCTACG GCTTCATGTA CAGCCTGCTG
GCCTCCTCCG CGATCCACCC GTCCGGCGGC TACAACCTGT CCTGGTACAA GGACGACGCG
ATCGACCAGG GCTTCACCAA GGCTCTGGGC GAGAACGACC CGACCGCCCG TGGCGCCGAC
TACGCGGCGA TCGACCACCA GGCGCTGGCC GACGCGCTGG TCGTCCCGCT GATCTGGGAC
AAGAACCTGG TCTACCGGCC GGAGTCGACG ACCAACGTCA TCTTCAGCCA GGGCTACGGC
ATGTACATCT TCTCCGCGAT GGGCGTGAAG TAA
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| Protein sequence | MNRSKLLGGV ALAACVALAA SACSSSKTNS GSSAPTTAVT TLPSGNTSAA TGFNAAVTGI
VRPTDAEGGT MTLVDRSDFD SLDPGNTYDA FSWSIIGDWA RPLMTYAQQP GNAGAKVVPD
LAEGPGVVSN NGMTWTYKIK PGVKYQDGSV VTSADVKYAI ERSNWGQDTL VNGPAYLPNF
IQDTTKYAGP YKDKNPNDGV SGITTPDNQT IVFNLTSPFS DFDYLMALPG SAPVPRAKDT
GADYFKTLLS TGQYKVDNYQ VGNELDLSPN PNFDKSTDPD KLHVVRASKI VVKLKQDKAT
IDDTLFDGSA NADLTGVGVQ PATQSKILGD PKLKADSDSA YANSTEYFAI NATQKPFDNV
NCRQAIEWII DKATLQTEAG GSQGGGDIAS TIDPPTIPGW KAGDQYLTAG NKGDATKAKA
SLAQCKTAEP DAFNADGSIK DTFEIMTRDN STKEATMVQT TQTNLKSIGI NTTIDTKPFD
KYNSQFAGNK TYVDQHKVAI SFMKWGADFP SGYGFMYSLL ASSAIHPSGG YNLSWYKDDA
IDQGFTKALG ENDPTARGAD YAAIDHQALA DALVVPLIWD KNLVYRPEST TNVIFSQGYG
MYIFSAMGVK
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