| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1288 |
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| Symbol | |
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| ID | 8332623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1462478 |
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| End bp | 1463488 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644954435 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003112054 |
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| Protein GI | 256390490 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACGC TGCCAGGGGA CGCCTCCACC CTGCACGACG ACTTCGGCGA CGAAGCCGCG
CCGGACCCCG GCACCCCGGC GGCGAAGGCC ATCGAGGGTC GGTCGCTGAC GCAGATCGCC
TGGTCGCGGT TGAAGAAGGA CCGCGTGGCG ATGGCCGCCG GCATCATCAT CGCGGTGCTG
GTCCTGATCG CGATCTTCGC CCCGCTGTTG GCCTCGGCGA CCGGCAACTC CGACCCGAAC
CAGCAGTTCA TGGACAGCAT CGACCCCAAC ACGGCGATGC CGCTGGGCTC GGCCGGCGGG
ATCAGCTCCA ACCACCTGCT GGGCCTGGAG CCGGTGATCG GCCGCGACGT CCTGACCCGG
GTGCTGCTCG GCTCGCGCAT CAGCCTGCTG ATCGCCACCT CGGCCTCGCT GCTCTCGCTG
TTCATCGGGA TCGCGCTGGG CGTCATCGCC GGCTACTTCG GCGGGTGGAT CGACACGCTC
ATCTCCCGCA TCATGGACGT CTTCCTGGCC TTCCCGCTGC TGCTGTTCGC CTTGGCGCTG
GCCGCGATCG TCTCCGACCA CGCCTTCGGG ATGTCGGGCG ACACCTTGCA CATAGCGATG
CTGATCTTCA TCATCGGCTT CTTCGGCTGG CCCTATGCCG GACGTATCGT CCGCGGCCAG
ACCATCGCGC TGCGCCAGCG GGAGTTCGTG GACGCCGCGC GGGTGCTCGG CGCCAAGCCG
CGCCGGATCA TCCTGCGCGA GCTGATGCCG AACCTGGTCG CCCCGATCCT GGTCTACGGC
ACCCTGCTGA TCCCGGCGAA CATCCTGTTC GAGGCCGCGC TGTCCTTCCT GGGCGTGGGT
ATCCGCCCGC CGACACCGTC CTGGGGCAAG ATGCTCAACG ACGCCATCGA GTACTACCGC
GTCGACCCCG CGTACCTGAT CATCCCGGGC GCGGCGATCT TCATCACCGT GATGGCCTTC
AACCTGTTCG GCGACGGCCT GCGCGACGCC TTCGACCCGA AGGCCCACTG A
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| Protein sequence | MTTLPGDAST LHDDFGDEAA PDPGTPAAKA IEGRSLTQIA WSRLKKDRVA MAAGIIIAVL
VLIAIFAPLL ASATGNSDPN QQFMDSIDPN TAMPLGSAGG ISSNHLLGLE PVIGRDVLTR
VLLGSRISLL IATSASLLSL FIGIALGVIA GYFGGWIDTL ISRIMDVFLA FPLLLFALAL
AAIVSDHAFG MSGDTLHIAM LIFIIGFFGW PYAGRIVRGQ TIALRQREFV DAARVLGAKP
RRIILRELMP NLVAPILVYG TLLIPANILF EAALSFLGVG IRPPTPSWGK MLNDAIEYYR
VDPAYLIIPG AAIFITVMAF NLFGDGLRDA FDPKAH
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