| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1286 |
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| Symbol | |
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| ID | 8332621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1459076 |
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| End bp | 1460860 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644954433 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003112052 |
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| Protein GI | 256390488 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGG AAACCGCTGT GATACCTAAG TTCTCGATCC GTGCGGGAGC CGCCGCGGCG
GCGCTCGCCC TGGTCCTGTC CGCCTGCGGC TCGAGCAGCG GCGCGGGCGG GGGTTCGGCC
ATGGGTCCGG GCTTCGACCT GGCGAGCAAG CAGGTGCTGA ACGCCTCGAC CAAGACCGGC
GGCACCATCA ACCTGGTCTC CTCGCAGTCC TTCGACTCGA TCGACCCGGG GGTCACCTAC
TCCGCGCAGA CCTGGAACCT GTTCCGGATG TTCGCCCGGC CGATGATGGC CTACGAGCAC
ACGCCCGGCG GCAACCAGAT CGTCGGCGAC CTGGCCACCG GCCCGGGCGT GCAGTCCAAC
GGCGGCAAGA GCTGGACCTA CACCCTGCGC GACAACGCCA CCTTCGAGGA CGGCACGCCG
ATCACCTCCG GCGACGTGCG CTGGGCCATC GAGCGCTCCA ACTGGTCCTC GCTGGTCGGC
AACGGCCCGA CCTACTTCCA CAACATCCTC ACGCCGCCGA ACGACCCGCG GTTCACGGAC
CTGGACGTGT ACAAGTCCGG GGACAAGATG TTCGACAACA TCATCGTCAC CACGGACCCG
AAGAAGATCA CCTTCAACCT CCCGCAGGCC TTCGGCGAGT TCGACTACGT GATGACCATG
CTGCAGACCG CTCCGGTCGA GCGCACCGTG GACGAGAAGG ACTCCGGCGA CACCTACGGC
AAGCGGCCGG TCTCCACCGG CGCCTACAAG ATCGCCAGCT ACTCCCCGGG CAAGGAGCTC
AAGCTGGTCC GCAACGCCGC CTACAACCAG CAGTCCGACC CCAACCACAT GCACACCTCG
CTGGCCGACG CCGTCGACGT GCAGCTCGGC GTGGACTCCG GGGAGCGCGA CCAGGAACTG
CTGGACGGCC AGGCCGACGC CGACCTGGGC TCGGCGCTGA CGGTGGCCAA CCACGCCAAG
GTGCTCCAGG ACCCGACGCT GAAGTCGCAG ACCGACGACG CCCCGGACTA CTCGATCGCC
TACTCCTCGA TCAACACCGA GCTGATCCCG GACGTCCCGT GCCGGCAGGC GATCGAGTAC
GCGGTGGACA AGAACACGGT GCTGAACCAG CTCGGCGGGC AGTGGGGCGG CACGGTCGCC
ACGAACCTGC TCACCGCCGG CATCCCCGGC GCGGTCCAGT TCCCGACGTA CACCTACGAT
CCGGCCAAGG CCAAGACCCT GCTGGCGACG TGCAAGACGG CCGACCCCGC GCTGTTCGAC
AGCAGCGGGG CGCTGACCTT CAAGATCGCC GCGCAGACCA ACGCCCCGGA CCTGCAGAAC
GCCGCGACCG CGATCCAGGC CTCGCTGGCC GGCGTGGGCA TCAGCACCCA GGTGACGCTG
TTCCCGTTCG GCCAGTACAG CCAGTACTGC GGCAACCAGG CCTACGCCAA GGCGCACCGG
CTCGGCATGT GCCTGGCCAA CTGGGGACCG GACTGGCTCA CCGGCTACGG CATGCTCGAC
CAGCTGGTGA CCTCCAACGG CATCGCGGCC ACCGGCAGCC AGAACTACGC CTTCCTCAAC
GACACGACGG TCAACTCCCT GGAGAAGGAA GCGCTGTCCA GCTTCGAGCC GAGCACCCAG
CAGCAGGACT GGGTCAAGAT CGACCACCGC GTGATGGACC TGGCGGCGTA CGTGCCGCTG
ATGGACCGGC ACATCATGCG CTTCCGGTCC GCCAAGCTCT CCAACGTGAT GATCGACCAG
GCCGGCAGCG GCGGCTACGA CCTGTCGGTC CTGGGTCTGA AGTGA
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| Protein sequence | MKKETAVIPK FSIRAGAAAA ALALVLSACG SSSGAGGGSA MGPGFDLASK QVLNASTKTG
GTINLVSSQS FDSIDPGVTY SAQTWNLFRM FARPMMAYEH TPGGNQIVGD LATGPGVQSN
GGKSWTYTLR DNATFEDGTP ITSGDVRWAI ERSNWSSLVG NGPTYFHNIL TPPNDPRFTD
LDVYKSGDKM FDNIIVTTDP KKITFNLPQA FGEFDYVMTM LQTAPVERTV DEKDSGDTYG
KRPVSTGAYK IASYSPGKEL KLVRNAAYNQ QSDPNHMHTS LADAVDVQLG VDSGERDQEL
LDGQADADLG SALTVANHAK VLQDPTLKSQ TDDAPDYSIA YSSINTELIP DVPCRQAIEY
AVDKNTVLNQ LGGQWGGTVA TNLLTAGIPG AVQFPTYTYD PAKAKTLLAT CKTADPALFD
SSGALTFKIA AQTNAPDLQN AATAIQASLA GVGISTQVTL FPFGQYSQYC GNQAYAKAHR
LGMCLANWGP DWLTGYGMLD QLVTSNGIAA TGSQNYAFLN DTTVNSLEKE ALSSFEPSTQ
QQDWVKIDHR VMDLAAYVPL MDRHIMRFRS AKLSNVMIDQ AGSGGYDLSV LGLK
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