Gene Caci_1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1282 
Symbol 
ID8332617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1454810 
End bp1455709 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content72% 
IMG OID644954429 
Producthypothetical protein 
Protein accessionYP_003112048 
Protein GI256390484 
COG category[S] Function unknown 
COG ID[COG0393] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGC TCCCACAGGC AGCCCGGGAC CGGATGGACG AGATCCGGAA CTCCGGCACC 
TGGGGCTCGG CCCTGACCAC CAACGAGTTC GCCGCCGTGC GCGCGGCCGG CTTCGAGCCG
GTCGGCCAGG TGCTGGGCTC GTGCGTGTAC CACCTGGGCT ACACCGGCGC CTACAACTGC
CCCGGGGCGT GGATGGGCGG CGCCGGCTAC ACCTCGACCT CCACCGGCCG CTACTCGGCG
TACGGGCCGC TGACGCAGTC CCTGTACGAG GCCCGGCGGC TGGCCGTGGA CCGGATGAGC
ACCGAGTGCA CGATGCTCGG CGGGGACGGC GTGGTCGGCG TGCGCCTGGC GATCCGGCGG
TTCCCGGCCG GCGGCCTGGA GTTCACCGCG ATCGGCACCG CGGTGCGCGC CGCGAACAGC
GCGGTGAAGC TGCGACAGCC GTTCACCTCC CACGTCACCG GCCAGGAGTT CGCCAAGCTG
ATGATGAACG GCTGGGTCCC GGTCTCGCTG GTGCTCGGCA TCGCCATCGG CACCCGGCAC
GACGACTGGT GGACCCGGAT GTCCTCGCGG CGCTGGGCCG GCAACCAGGA GGTCGCCGGC
TACACCGATC TGGTGAACCA GACCCGGCAC GCCTCGCGGG CGGAGCTGGC CCGCAACGTG
CGCGGCGTGC ACGCCGACGG CGTTGTGGTG TCCTCCATCG AGCTGGAGAT CCGGGAGCGC
GAGTGCCCGG TGACCGACGG GCAGCGCGAC CACATCTGCG AGGCGACGGC GATCGGCACC
GCGATCGCGG CGTTCAAGAC CAGCGGCCAG CCGGCCCGGA CCGGCTCGCT GGCGATCATG
TCGCTGGACC CGGAGCGGCG CGCCGCCGCC CGGCGTGAGA CTTCTGTGCG ATACCTGTGA
 
Protein sequence
MEQLPQAARD RMDEIRNSGT WGSALTTNEF AAVRAAGFEP VGQVLGSCVY HLGYTGAYNC 
PGAWMGGAGY TSTSTGRYSA YGPLTQSLYE ARRLAVDRMS TECTMLGGDG VVGVRLAIRR
FPAGGLEFTA IGTAVRAANS AVKLRQPFTS HVTGQEFAKL MMNGWVPVSL VLGIAIGTRH
DDWWTRMSSR RWAGNQEVAG YTDLVNQTRH ASRAELARNV RGVHADGVVV SSIELEIRER
ECPVTDGQRD HICEATAIGT AIAAFKTSGQ PARTGSLAIM SLDPERRAAA RRETSVRYL