Gene Caci_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1278 
Symbol 
ID8332613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1450481 
End bp1451143 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID644954425 
Productputative cholesterol esterase 
Protein accessionYP_003112044 
Protein GI256390480 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGACG CATTGGGCTC CCAGGTGCTG GGCGGCACCA AGTGGAAGCG CTTCGCCCTG 
GTGATGGTCC CCACCGTCGG CATCGCCGGC GCGATGACCG TCGCGATGGC CAACGGTGTG
CTGGCGAGCT CCTTCGCCGT GTCCGGCCAG CAGTTCAAGG TCTCCGCCGA CCAGCTCGAC
GGCCAGACCT TCGTGCAGTC CGGCGACGTG ATCGTGGACG CCAACGGCGT GCCGCACGCG
GTCGCCGTGG CCGGCATCAA GAGCGCCACC ATCAGCAACA TGTGCCAGTC GGTGAACGTC
CCGGTGCTGG GCCTGGGCAA CCTGACCATC GTGCTGAAGG CCGGCGGCGG CGGTACCCCG
GTGGCCGCCA CGAGCCTGGT CCTGGACACC AACCAAGTGG ACGCCGACGC CACGTTCACC
GGCGTGACCA TCGGCGCCAG CGCCGGCGAC ATCGCCAGCA AGGCCGGCAT CCAGGGCTTC
GAGAAGCACA CCGGCAACAA GGACGGTTCG ACCACGCCGT TCGGCGCCGG CGACTTCGGG
CAGGTCGTGG ACCACGCCGT GCTGACCGGT GTGCGGCAGA CGGCCTACTC CACCACCGCC
GGCACCATGG CGCTCAAGGG CCTGTCCATC TCGGCGAACC TGAACGGCAA GGAATGCTTC
TAG
 
Protein sequence
MKDALGSQVL GGTKWKRFAL VMVPTVGIAG AMTVAMANGV LASSFAVSGQ QFKVSADQLD 
GQTFVQSGDV IVDANGVPHA VAVAGIKSAT ISNMCQSVNV PVLGLGNLTI VLKAGGGGTP
VAATSLVLDT NQVDADATFT GVTIGASAGD IASKAGIQGF EKHTGNKDGS TTPFGAGDFG
QVVDHAVLTG VRQTAYSTTA GTMALKGLSI SANLNGKECF