Gene Caci_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1276 
Symbol 
ID8332611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1448927 
End bp1449940 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content74% 
IMG OID644954423 
Productthioredoxin domain protein 
Protein accessionYP_003112042 
Protein GI256390478 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAGC GACCTCAGAT CCCCGGGATG GCTGCCGGCG GTGGCCCCGG CCTGCCCGCC 
TCCGCCCTGC GCGGGGTGGT GGACCTCGGG GCCCTCGCCG CCAAGCCGCA GGCGGCACCG
GCCGCGACGG CCCAGGGACC CGGCGCCGGC ACCGGCGGCG AGGGCTCCGG ACCGGCCGGC
GGCGGTACCG ACGCCATCGC CTCGCCCTTG GTCTTCGACA CTTCCGACGC CACGTTCGAC
ACCGATGTCA TCGAGCGGTC GCTGACCGTC CCGGTGGTCA TCGACTTCTG GGCCGAGTGG
TGCGGCCCGT GCAAGCAGCT CTCGCCGCTG CTGGAGCGCC TGACCGTCGA GTACGGCGGC
CGCTTCGTGC TGGCGAAGCT GGACGTGGAC GCGAACCCGG CGCTGGCGCA GGAGTTCGGC
ATCCAGTCCA TCCCGATGGT CATGGCGGTG GTCGGCGGCC GGCTGGTCCC GCTGTTCCCG
GGCGCGGTCC CGGAGGCGCA GGTCCGCCGC TACCTGGAGG AGCTGCTGCG GCTGGCCGCG
GAGAACGGCG TCACCGGCAC CGCCGACGGC CAGGCGCCCG AGGAACTGCC CGAGCCGCCG
ATGGACCCGG CGCTGGCCGC GGCCTACACC GCGCTGGAGG AGAACGACCT CGACGGCGCC
GCGCAGGCCT TCCGCAACGT GCTGAACGCC AACCCCGGCG ACACCGAGGC GAAACTGGCG
CTGGCCCAGG TCGAGCTGAT GCTGAACACC CGCGACCTGG ACGTCGACCA GGTGCGGGCC
GACGCCGAGG CCAAGCCCGA CGACGCCGCG GCCCAGATCG CCGCCGCGGA GCTGGACCTG
TCCACCGGCC GCGTGGACGA GGCGATCGAC CGGCTGGTGG GCTTCGTGGC CCGCAGCGCC
GGCGCCGACC GGGATGCCGC ACGGGTGAAG TTGCTCGACT TCTTCGAGCT GTTGGGCCCG
GAGGACCCGC GCACCGCGAC GGGCCGCCAG AAGCTGACCA GGGTCTTGTT CTGA
 
Protein sequence
MRQRPQIPGM AAGGGPGLPA SALRGVVDLG ALAAKPQAAP AATAQGPGAG TGGEGSGPAG 
GGTDAIASPL VFDTSDATFD TDVIERSLTV PVVIDFWAEW CGPCKQLSPL LERLTVEYGG
RFVLAKLDVD ANPALAQEFG IQSIPMVMAV VGGRLVPLFP GAVPEAQVRR YLEELLRLAA
ENGVTGTADG QAPEELPEPP MDPALAAAYT ALEENDLDGA AQAFRNVLNA NPGDTEAKLA
LAQVELMLNT RDLDVDQVRA DAEAKPDDAA AQIAAAELDL STGRVDEAID RLVGFVARSA
GADRDAARVK LLDFFELLGP EDPRTATGRQ KLTRVLF