Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1266 |
Symbol | |
ID | 8332601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1435527 |
End bp | 1436621 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644954413 |
Product | beta-lactamase |
Protein accession | YP_003112032 |
Protein GI | 256390468 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.270012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGAGG ACGCCCTCCA CCGCATCGCC ACGCTCGTCG CCGACCGCCC GGGACAGGCC CAGCTGCACG TCCTGCGCCA CGGGACGCCG GTCCTCGACC TGAACGTCCG CTGCGCGCCG GACACCCCGT TCCTGTTGTG GTCGACCGGA AAACCGCTCA CCGCGATGGC CGTCCACCAG CTCGCCGAGC GCGGTCTGCT CGACCTGGAC GCCCCGATCG CCGAGCACTG GCCCGAGTAC GGCCGCGCCG GCAAGGAATC CGCGACCCCG CGCCACGCGC TCACCCACTC CACCGGCGCG CCGCTGTCCA CCTGGCACGT CGTCGGCGAC GCCTGGATCA TGCACGACTG GGACCGCTCG GTCCGCGCGG CGGCAGCCGC CCCGGCGAAG CGCGAACCGG GGTGGTCCTC GGCGTACCAC ATCCTCAGCC AGGGCTTCAT CCTCGGCGAA CTCCTCCAGC GCGTCACCGG CACGCAGCTC GCCGAGTATC TGAGTACGGA GATCCTCGCT CCTGCCGGGC TGCACCACAC CACCCTCGGA CTGCCGACCT CACAATGGGA CGCGCGAGCG GTCCTCGAAC TGTCCAAGAC GCCGCGAACC CAGCTCCCCG ACCGCCTGAA GGTGGCGCGC TTCGCGAAGA AAACCGTTCG CACAGCACCG ATCCCGGCCG CGACGGTCCA TTCCACGGCG CGCGATATGG CGCGCTTCTT CCAGCTGCTA CTGGACGGCG GCAGCATCGA CGGCGTGACC GTGTTCAAGC CGGAAACCGT GCAGTCCGCT AGGAATCCCG CCCTGTATGG AGCACCCGGC GTCCGTCCCG ACCCGATCAT CGGCCACACC GTCCGCTGGG CCCACGGCTT CCAACTCGGC TGGGGCGCGC GATCGGTCCA GACCGCCCAG CCCTTCGGCG TCACGGCGGG GGAGGAGGTC TTCGGCCACA ACGGCAGCAA CTACTGCAAC GCCTGGGCCG ACCCCGAACA CGGACTCGTA TTCGCCTACC TGACCAACTA CATGACCCCC CGAGGCCCGG CGCTCGCCTG GCAGACGGAA CTCAGCGATT TGGTCCGCGC CGCTGTCGCG TCCGAGATGC AGTGA
|
Protein sequence | MTEDALHRIA TLVADRPGQA QLHVLRHGTP VLDLNVRCAP DTPFLLWSTG KPLTAMAVHQ LAERGLLDLD APIAEHWPEY GRAGKESATP RHALTHSTGA PLSTWHVVGD AWIMHDWDRS VRAAAAAPAK REPGWSSAYH ILSQGFILGE LLQRVTGTQL AEYLSTEILA PAGLHHTTLG LPTSQWDARA VLELSKTPRT QLPDRLKVAR FAKKTVRTAP IPAATVHSTA RDMARFFQLL LDGGSIDGVT VFKPETVQSA RNPALYGAPG VRPDPIIGHT VRWAHGFQLG WGARSVQTAQ PFGVTAGEEV FGHNGSNYCN AWADPEHGLV FAYLTNYMTP RGPALAWQTE LSDLVRAAVA SEMQ
|
| |