Gene Caci_1266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1266 
Symbol 
ID8332601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1435527 
End bp1436621 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content70% 
IMG OID644954413 
Productbeta-lactamase 
Protein accessionYP_003112032 
Protein GI256390468 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.270012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGG ACGCCCTCCA CCGCATCGCC ACGCTCGTCG CCGACCGCCC GGGACAGGCC 
CAGCTGCACG TCCTGCGCCA CGGGACGCCG GTCCTCGACC TGAACGTCCG CTGCGCGCCG
GACACCCCGT TCCTGTTGTG GTCGACCGGA AAACCGCTCA CCGCGATGGC CGTCCACCAG
CTCGCCGAGC GCGGTCTGCT CGACCTGGAC GCCCCGATCG CCGAGCACTG GCCCGAGTAC
GGCCGCGCCG GCAAGGAATC CGCGACCCCG CGCCACGCGC TCACCCACTC CACCGGCGCG
CCGCTGTCCA CCTGGCACGT CGTCGGCGAC GCCTGGATCA TGCACGACTG GGACCGCTCG
GTCCGCGCGG CGGCAGCCGC CCCGGCGAAG CGCGAACCGG GGTGGTCCTC GGCGTACCAC
ATCCTCAGCC AGGGCTTCAT CCTCGGCGAA CTCCTCCAGC GCGTCACCGG CACGCAGCTC
GCCGAGTATC TGAGTACGGA GATCCTCGCT CCTGCCGGGC TGCACCACAC CACCCTCGGA
CTGCCGACCT CACAATGGGA CGCGCGAGCG GTCCTCGAAC TGTCCAAGAC GCCGCGAACC
CAGCTCCCCG ACCGCCTGAA GGTGGCGCGC TTCGCGAAGA AAACCGTTCG CACAGCACCG
ATCCCGGCCG CGACGGTCCA TTCCACGGCG CGCGATATGG CGCGCTTCTT CCAGCTGCTA
CTGGACGGCG GCAGCATCGA CGGCGTGACC GTGTTCAAGC CGGAAACCGT GCAGTCCGCT
AGGAATCCCG CCCTGTATGG AGCACCCGGC GTCCGTCCCG ACCCGATCAT CGGCCACACC
GTCCGCTGGG CCCACGGCTT CCAACTCGGC TGGGGCGCGC GATCGGTCCA GACCGCCCAG
CCCTTCGGCG TCACGGCGGG GGAGGAGGTC TTCGGCCACA ACGGCAGCAA CTACTGCAAC
GCCTGGGCCG ACCCCGAACA CGGACTCGTA TTCGCCTACC TGACCAACTA CATGACCCCC
CGAGGCCCGG CGCTCGCCTG GCAGACGGAA CTCAGCGATT TGGTCCGCGC CGCTGTCGCG
TCCGAGATGC AGTGA
 
Protein sequence
MTEDALHRIA TLVADRPGQA QLHVLRHGTP VLDLNVRCAP DTPFLLWSTG KPLTAMAVHQ 
LAERGLLDLD APIAEHWPEY GRAGKESATP RHALTHSTGA PLSTWHVVGD AWIMHDWDRS
VRAAAAAPAK REPGWSSAYH ILSQGFILGE LLQRVTGTQL AEYLSTEILA PAGLHHTTLG
LPTSQWDARA VLELSKTPRT QLPDRLKVAR FAKKTVRTAP IPAATVHSTA RDMARFFQLL
LDGGSIDGVT VFKPETVQSA RNPALYGAPG VRPDPIIGHT VRWAHGFQLG WGARSVQTAQ
PFGVTAGEEV FGHNGSNYCN AWADPEHGLV FAYLTNYMTP RGPALAWQTE LSDLVRAAVA
SEMQ