| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1255 |
|---|
| Symbol | |
|---|
| ID | 8332590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 1424971 |
|---|
| End bp | 1426362 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644954402 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003112021 |
|---|
| Protein GI | 256390457 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCCA CGCGCGGCGC CGAGATCAGT AGTGCGACCT GGCGATTCCG GGGTGGGGCC
AGCACCACCC CCGGGGTGAG GCAGGCTCGA TGGACCGGGG CGGAGCTGCG CCAATACCGT
GAAGGCGTGC CGATGACGCG AGAGATCCTG CGGGCGCGCT GGAGCCAGGC CGGCGGGGAC
GCCCTGTTCC TGGTCACCGG GCTGCCGCTG TGGGCCGCGG CGATGATGGT CCTGCTGGTC
TGGAGCCAGC CGGCCTATCT GCTCCTGCAG GCCGAGGACC CCGGCGTCCT CCGCTTCGGG
GTCTCGGTGG TGATCGTGCT CGCCGCGGTG CTCACGCTGG CGCCGTTCCT CACGCGCTGG
CACCGCATCC GCTTCCGCAC CTTCCGGAGC ACGGAGATCC TCGAGATCGA CACGCCGCGG
CTGTACCGCG GGCAGCTCCG GCAGGCGCTG CGGTCCGAGG CGCTGTGGCG GCAGGCGCTC
TACCACCTGA TCGCCGGACC GCTGATCGGG ATCGCGGTCG TGGCCCTGGC GTTCATGGAC
CTGCTCGCGA TCGTGGTGGC GGCCAGGCTT CCCGCGCACG CGCTGGGCCT GCTGGACCCC
GGGCACGGAG TCAGCTCGAA GTTCTGGGGC CAGTGCGCTT ACATCCTGCT CGCCGGCACC
GTCACCTACT CCGGACCGCG CCTGCTCCGC GTGCTCGCCG ACGCCGACCT CGGCGCCGCC
CGGCGGCTGC TCGGCCCGAG CGAGACGATC GTGCTGGCGC ACCGGGTGCA GACGCTGTCC
GACAGCCGCG CCGCCGCGGT CGAGGCCGCC GACACCGAAC GCCGCCGCAT CGAGCGCGAT
CTGCACGACG GCGCGCAGCA GCGCCTGATG TCCCTGGCGG TGCATCTGGG CATCGCCCGC
AAGACGCTCA AGGACGTCCC GCCCGAGGCG ATGTCCGTCA TCATCGACGC GCACGAACAG
GTCAAGGACG CGATGGCGGA GATCCGCGAC CTGGTGCGCG GCATGCATCC GGCGGTCCTG
GACGACCGCG GCCTGGACGC CGCGCTCTCC GGCGTCGCGG CGCGCTCGGC GGTCCCGGTG
CGCCTGACCG TCGGCACCAC CGGACCGCTG AGCGCGTCGG TGGAGACCGT CGCCTACTTC
GTCGTCTCCG AGGCGCTGGC GAACGTGGTC AAGCACTCCC GCGCCAAGCA GGCGACCGTG
GACGTCACCC GCGACGACGG CAGGCTGCTG ATCCGCGTCA GCGACGACGG CGTCGGCGGC
GCGGACGCCC ACGGCGGCAC CGGGCTGACC GGGCTGGCTC AGCGGGTCGC TTCGGTGGAC
GGGCTGCTGC GGCTAACATC GCCGAGCGGC GGTCCCACGG TGCTGACCGC CGAACTGCCC
TGCGGGGTGT GA
|
|---|
| Protein sequence | MLATRGAEIS SATWRFRGGA STTPGVRQAR WTGAELRQYR EGVPMTREIL RARWSQAGGD
ALFLVTGLPL WAAAMMVLLV WSQPAYLLLQ AEDPGVLRFG VSVVIVLAAV LTLAPFLTRW
HRIRFRTFRS TEILEIDTPR LYRGQLRQAL RSEALWRQAL YHLIAGPLIG IAVVALAFMD
LLAIVVAARL PAHALGLLDP GHGVSSKFWG QCAYILLAGT VTYSGPRLLR VLADADLGAA
RRLLGPSETI VLAHRVQTLS DSRAAAVEAA DTERRRIERD LHDGAQQRLM SLAVHLGIAR
KTLKDVPPEA MSVIIDAHEQ VKDAMAEIRD LVRGMHPAVL DDRGLDAALS GVAARSAVPV
RLTVGTTGPL SASVETVAYF VVSEALANVV KHSRAKQATV DVTRDDGRLL IRVSDDGVGG
ADAHGGTGLT GLAQRVASVD GLLRLTSPSG GPTVLTAELP CGV
|
|---|
| |