Gene Caci_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1245 
Symbol 
ID8332580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1412717 
End bp1413457 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content71% 
IMG OID644954392 
Producthypothetical protein 
Protein accessionYP_003112011 
Protein GI256390447 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.587556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG ACATCCGCGC CACCACGATC CTGCCGGCCG AGCGCCGTCC GGTGACCCTG 
ACCACCGCCG ACGGCCTGGA CCTGGTCGGC GAGCTGGCTC TGCCGCCGGA AGGCCGCACC
CCGGCCGGCA CATTGGTCAC GCTGCACCCG CTGCCCACCC ACGGCGGCTT CATGGACAGC
CACGTCTACC GCAAGGCCGC CTGGCGCCTC CCGGCCCTGG CGGACCTGGC AGTGCTCCGC
TTCAACACCC GCGGCACGAC CTCCCCGGCG GGCCGCAGCC AAGGCGAGTT CGACAACGGC
GTGGGCGAGC GCTTCGACGT CCAGGCCGCC ATCGAGTACG CGGACTTCGC CGACCTCCCG
AACCGCTGGC TGATCGGCTG GTCCTTCGGC ACCGACCTGG CCCTGATGTA CGGCGACGAC
CCGACCATCG ACGGCCTGAT CCTGCTCTCC CCGCCGCTGC GCTACTCCCG GCCGGAGGAC
CTGGACCGCT GGGGCGCGTC CGGGAAGCCG GTCGTAGTGC TGGTCCCCGA GTTCGACGAC
TACCTGCGTC CGGCTGAAGC CGCCGAGCGC TTCGCCCGCA TCCCGCAGGC CGAGGTGATC
GGCGTGGACG GCGCGAAGCA CTTGTGGGTC GGCGAGAAGT ACGTGCAGCG CGCGCACAAC
GAGATCGTGA AGCGCGTGAA CCCGGCGGCT TATCCGCTGG CAACGACCTG GGACGGGGAG
TTCGAGACGT TCGCTGAATA G
 
Protein sequence
MSTDIRATTI LPAERRPVTL TTADGLDLVG ELALPPEGRT PAGTLVTLHP LPTHGGFMDS 
HVYRKAAWRL PALADLAVLR FNTRGTTSPA GRSQGEFDNG VGERFDVQAA IEYADFADLP
NRWLIGWSFG TDLALMYGDD PTIDGLILLS PPLRYSRPED LDRWGASGKP VVVLVPEFDD
YLRPAEAAER FARIPQAEVI GVDGAKHLWV GEKYVQRAHN EIVKRVNPAA YPLATTWDGE
FETFAE