| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1240 |
|---|
| Symbol | |
|---|
| ID | 8332575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1407310 |
|---|
| End bp | 1408407 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644954387 |
|---|
| Product | sodium/calcium exchanger membrane region |
|---|
| Protein accession | YP_003112006 |
|---|
| Protein GI | 256390442 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0387] Ca2+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.228892 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCGC TTGCGGAACG CTCACGAGTC TTCTCCCGGT CGGACCTGAT CTTCCTGGGT
CTGGCCGTGG TGACCACGGT GGGAGCGGTG GTGGTGCGCA GCGGCTCGGT GCTGCCGTTC
GTGGTCTCGG CGGCCGCGGT CGCCGTGCTC GCCGCGCTCG TGGGGCGGGC CGTGGACCAT
CTCGCCGACC GGCTCGGCGC CGGGGCGGTC GGGGTGTTGC AGAGCGCGCT GGGCAACCTG
CCGGAGCTGT TCATCTCGAT CTTCGCCCTG CGCGCCGGCC TGACGACCGT GGTCACCTCG
GCGATCATCG GCTCGATCCT GGCCAACCTG CTGCTGGTGC TGGGGCTGTC GTTCACCGTG
GGCAGCGCGC GCCACGGGGT GCTGCGGTTC TCGGAGCAGC GGGCCCGGCT CATCATGGGC
CTGATGATCC TGTCGGTGGC CTCGATGCTG ATCCCGAGTC TGGCGTCCTA CATCCACTCC
CCGGCCGCCG GCCACGAGGT GGCGCTGTCC CGCATCACGG CGATCGTCCT GCTGACGGTG
TTCGCCCTGT CGATTCCGGC GAGCCTGCGC AGAGAGGCGG AACCGCGAGC CGCCGAGCAG
TCCGCCGAGG CCAGCGAGGA GGAGGGCGGG GGCAACCACT GGCCGCTGTG GCTGGCCGTC
GGCATGCTGG CCGTCACCGG CCTGGCCGCG GCGTACGTCT CCGACCTGTT CGTCGACGCC
CTGACCCCGG CGATGAACTC GCTGCACATC TCGCAGGCCT TCTCCGGCCT GGTGATCGTC
GCCATCGCGG GCAACGCGGT GGAGAACGCG GTCGGGGTGA AGCTGGCCTG GCAGAACCAG
GCCGACCACG CGCTGTCGGT GGTCCTGAAC AGCCCGCTGC AGATCGCCCT GGTGCTGGCG
CCCGCGCTGG TGCTGCTCTC GCCGGTGATC GGGGGACCGG CGTTCACCCT GGTGTTCAAC
CCGATGCTGG TGACCACGGT CGGGATCGCG ACGCTGGCGG TGCTGTATCT GATCTCTGAC
GGCGAGTCGG ACTGGCTGGA GGGATCGGCG ATGATCGGGC TCTACGTGTT GGTGGCGACG
GCTTTCTGGT GGGGGTAG
|
|---|
| Protein sequence | MTALAERSRV FSRSDLIFLG LAVVTTVGAV VVRSGSVLPF VVSAAAVAVL AALVGRAVDH
LADRLGAGAV GVLQSALGNL PELFISIFAL RAGLTTVVTS AIIGSILANL LLVLGLSFTV
GSARHGVLRF SEQRARLIMG LMILSVASML IPSLASYIHS PAAGHEVALS RITAIVLLTV
FALSIPASLR REAEPRAAEQ SAEASEEEGG GNHWPLWLAV GMLAVTGLAA AYVSDLFVDA
LTPAMNSLHI SQAFSGLVIV AIAGNAVENA VGVKLAWQNQ ADHALSVVLN SPLQIALVLA
PALVLLSPVI GGPAFTLVFN PMLVTTVGIA TLAVLYLISD GESDWLEGSA MIGLYVLVAT
AFWWG
|
|---|
| |