Gene Caci_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1236 
Symbol 
ID8332571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1403074 
End bp1404045 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content72% 
IMG OID644954383 
ProductAlkanal monooxygenase (FMN-linked) 
Protein accessionYP_003112002 
Protein GI256390438 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.282844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0150707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG GTCTTTTTCT GGTGGCGGCG GGCTTTCCGG GCATCTCGGC GGAGCAGGCG 
CTGCGCACCG CGCTGGACCT CGGCGTCGCC GCCGAAGACG CCGGGTTCGA CGACGTCTTC
ATGGCCGAAC ACCACTTCAT GCCGTACGGC ACCTGTCCGT CAGCTCTCAC TTTCGCCGCA
ATGCTGGCCG GGCGCACCCG CGGGATCGGG CTGGGGACGG CGGTGACGGT GCTGTCCACC
GCGCATCCGG TCGCGGTGGC CGAGCAGGCG GCGATGCTGG ACGTGCTCAC CGGCGGGCGG
TTCACGCTGG GGGTCGGGCG CGGCGGGCCG TGGGTGGACC TGGAGGTGTT CGGCACCGGG
ATGGAGGGGC TCTCGCGGCG GGCGTTCGCC GAGGCGCTGG ACGTGCTGTG CGCCTGGGGA
TCGCAGGACG CTGTCTCCTA CGACGGCGAG TTCCACCGGT TCCGCGAGGT TCCGGTCGTT
CCGCGCGGAC GTCCGGGGAT GCTGGTGGCG TGTACGTCCC CTGAGACGCT GGAGATGGCG
GCCGGCCGGC GACTGCCGAT GCTGCTCGGC ATGCACGCCG ACGACGCCGA GAAGGCAGCG
ATGGTGCGCG CCTACGGCTC CCCCGCGCCG CACGCGTCGG TGGTCGTCGC ACAGGTCGCC
GAGTCCCGCG GCGCCGGTAT CAGGCTTCTG CGACAGACGA TGCCGACGTG GCTGCGCCCC
GGCCTGGCCG CGCACGTCCG CTTCGACGGA ACGCAGGCGG CGATGCGCGA CCCCGACGCC
TATGCCGAGT ACCTGACGGC GATCCATCCG ATCGGGCCGG CGTCCTACTG CGCGGACCGG
ATCCTGGAAT CGAGCCAGGT CACCGGGATC GAGCACGTCC TGCTCTTCGT CGAGGGCGGC
GGTCCCGAGC ACACGCCGGC GAATATCAAA GCTCTGGGAA GCTCGGTCCT GCCGCTGCTG
CGCGGCGCGT GA
 
Protein sequence
MRIGLFLVAA GFPGISAEQA LRTALDLGVA AEDAGFDDVF MAEHHFMPYG TCPSALTFAA 
MLAGRTRGIG LGTAVTVLST AHPVAVAEQA AMLDVLTGGR FTLGVGRGGP WVDLEVFGTG
MEGLSRRAFA EALDVLCAWG SQDAVSYDGE FHRFREVPVV PRGRPGMLVA CTSPETLEMA
AGRRLPMLLG MHADDAEKAA MVRAYGSPAP HASVVVAQVA ESRGAGIRLL RQTMPTWLRP
GLAAHVRFDG TQAAMRDPDA YAEYLTAIHP IGPASYCADR ILESSQVTGI EHVLLFVEGG
GPEHTPANIK ALGSSVLPLL RGA