Gene Caci_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1232 
Symbol 
ID8332567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1398104 
End bp1399072 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content69% 
IMG OID644954379 
Producthypothetical protein 
Protein accessionYP_003111998 
Protein GI256390434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.383177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00088208 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAACTCA GCAGAAGGAC TCTGCTCGCG GGGGCGGCGG CGGCCGTCGC CACGCCGGCC 
ACGATGTGGC TGGCCGAGGG GACGGCCCAG GCCGCCGCGA GCTATGACGT CGCTGTGTGC
GAGCAGTACC GGAACCAGAT ACAGATCTAC TCCTCGGCGG CGGGCTGGAC CTCGCCGAAG
TGGGTGTGGT CGCCGGGCGG GGGCGGCTGG TCGAACCTGT CGGACGTGAA GTTCCGCAAC
ACGGCGAAGT TCGGCGAGGT GGCGCTGGTC GCGGCCTCCG GCGGCAACGT CGGCATCATC
GACAAGAACG CCTCGGGCAC CCAGGGCACC GGCAGCCTGC TGTGGCACGC CGCCCCGGGC
TCCAACCCGC ACGCGATCGA GCGCATCCCG AACATCGGCG CCATCGTCGC CGCCTCCTCC
GGCGGCTACC TGCACGTCTA CGCACCGACC GCGGTCAACG ACCCCAGCAC GCTCGCCCTG
GTGCAGACCA TCAGCTTCCC CGGCGCGCAC GGCCTGTGGT ACGACGACGT CCACAACCGC
CTCTGGGCGG TCGGCCAGGG CAAGGCGACC TCCTACGCGG TCAGCGGCAC CTACCGCAAC
ACCCGCCTGA CCGGCGGCGT CAACATCTCC ATCGGCGCGA GCAACCTCGG CCACAGCCTC
GACGCCTCCT ACAAGAACAG CGCGATCCTG CTCGTCAGCC ACAGCACCGC GGTGATCTCC
ATCAACAAGA CCACCCACGC GGTGAGCACC GTCCACGCCA ACCACGCGGT GAAGTCCTTC
AGCCAGCACT CCTCCGGGGA AGCCTTCTGG GTCCAGAGCA CCGGCAAGAA GTACCACGGA
GACACCCGCA ACTGGGTCAA CCCCGACGTC CAATTCTTCA ACGCAGCCGG CGCCCGCTCC
TTCACCCGAG GCCTGTCCTA CGGAGCGGAG TTCTACAAAG CCCGCCTCCA CGCCGTCGGC
TACCACTGA
 
Protein sequence
MQLSRRTLLA GAAAAVATPA TMWLAEGTAQ AAASYDVAVC EQYRNQIQIY SSAAGWTSPK 
WVWSPGGGGW SNLSDVKFRN TAKFGEVALV AASGGNVGII DKNASGTQGT GSLLWHAAPG
SNPHAIERIP NIGAIVAASS GGYLHVYAPT AVNDPSTLAL VQTISFPGAH GLWYDDVHNR
LWAVGQGKAT SYAVSGTYRN TRLTGGVNIS IGASNLGHSL DASYKNSAIL LVSHSTAVIS
INKTTHAVST VHANHAVKSF SQHSSGEAFW VQSTGKKYHG DTRNWVNPDV QFFNAAGARS
FTRGLSYGAE FYKARLHAVG YH