Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1232 |
Symbol | |
ID | 8332567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1398104 |
End bp | 1399072 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644954379 |
Product | hypothetical protein |
Protein accession | YP_003111998 |
Protein GI | 256390434 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.383177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00088208 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAACTCA GCAGAAGGAC TCTGCTCGCG GGGGCGGCGG CGGCCGTCGC CACGCCGGCC ACGATGTGGC TGGCCGAGGG GACGGCCCAG GCCGCCGCGA GCTATGACGT CGCTGTGTGC GAGCAGTACC GGAACCAGAT ACAGATCTAC TCCTCGGCGG CGGGCTGGAC CTCGCCGAAG TGGGTGTGGT CGCCGGGCGG GGGCGGCTGG TCGAACCTGT CGGACGTGAA GTTCCGCAAC ACGGCGAAGT TCGGCGAGGT GGCGCTGGTC GCGGCCTCCG GCGGCAACGT CGGCATCATC GACAAGAACG CCTCGGGCAC CCAGGGCACC GGCAGCCTGC TGTGGCACGC CGCCCCGGGC TCCAACCCGC ACGCGATCGA GCGCATCCCG AACATCGGCG CCATCGTCGC CGCCTCCTCC GGCGGCTACC TGCACGTCTA CGCACCGACC GCGGTCAACG ACCCCAGCAC GCTCGCCCTG GTGCAGACCA TCAGCTTCCC CGGCGCGCAC GGCCTGTGGT ACGACGACGT CCACAACCGC CTCTGGGCGG TCGGCCAGGG CAAGGCGACC TCCTACGCGG TCAGCGGCAC CTACCGCAAC ACCCGCCTGA CCGGCGGCGT CAACATCTCC ATCGGCGCGA GCAACCTCGG CCACAGCCTC GACGCCTCCT ACAAGAACAG CGCGATCCTG CTCGTCAGCC ACAGCACCGC GGTGATCTCC ATCAACAAGA CCACCCACGC GGTGAGCACC GTCCACGCCA ACCACGCGGT GAAGTCCTTC AGCCAGCACT CCTCCGGGGA AGCCTTCTGG GTCCAGAGCA CCGGCAAGAA GTACCACGGA GACACCCGCA ACTGGGTCAA CCCCGACGTC CAATTCTTCA ACGCAGCCGG CGCCCGCTCC TTCACCCGAG GCCTGTCCTA CGGAGCGGAG TTCTACAAAG CCCGCCTCCA CGCCGTCGGC TACCACTGA
|
Protein sequence | MQLSRRTLLA GAAAAVATPA TMWLAEGTAQ AAASYDVAVC EQYRNQIQIY SSAAGWTSPK WVWSPGGGGW SNLSDVKFRN TAKFGEVALV AASGGNVGII DKNASGTQGT GSLLWHAAPG SNPHAIERIP NIGAIVAASS GGYLHVYAPT AVNDPSTLAL VQTISFPGAH GLWYDDVHNR LWAVGQGKAT SYAVSGTYRN TRLTGGVNIS IGASNLGHSL DASYKNSAIL LVSHSTAVIS INKTTHAVST VHANHAVKSF SQHSSGEAFW VQSTGKKYHG DTRNWVNPDV QFFNAAGARS FTRGLSYGAE FYKARLHAVG YH
|
| |