| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1216 |
|---|
| Symbol | |
|---|
| ID | 8332551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1371204 |
|---|
| End bp | 1372838 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644954363 |
|---|
| Product | F0F1 ATP synthase subunit alpha |
|---|
| Protein accession | YP_003111982 |
|---|
| Protein GI | 256390418 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAGC TCACGATCCG TCCGGAGGAG ATCCGGGACG CGTTGGAGCG CTTTGTCGCT
TCCTACGAGG CGCCCGAGGC GTCGAAGGAC GAAGTCGGCA CCGTGACCGA GATCGGTGAC
GGCATCGCCA AGGTCGAAGG TCTGCCCTCG GCGATGACCA ACGAGCTGCT GAAGTTCGAG
GACGGCACTC TGGGCATCGC CCTGAACCTG GACGTCCGGG AGATCGGCGT CGTGGTCCTG
GGCGACTACG AAGGCATCGA AGAAGGCCAG CGGGTCGCGC GCACCGGAGA GATCCTGTCC
ACCCCGGTCG GCGACAGCTT CATGGGCCGC GTGGTGAACC CGCTCGGCGA GCCGATCGAC
GGCCTGGGCC CGATCGAGGC CGAGGGCACC CGCATCCTGG AGCTGCAGGC GCCGGGCGTC
ATGGCCCGGC AGTCGGTCAA GGAGCCGCTG CAGACCGGGA TCAAGGCCAT CGACTCGATG
ACCCCGATCG GCCGCGGCCA GCGCCAGCTG ATCATCGGCG ACCGGCAGAC CGGCAAGACC
GCGGTCGCCG TCGACACGAT CATCAACCAG AAGCAGAACT GGGAGTCCGG CGACCCCAAG
AAGCAGGTCC GCTGCATCTA CGTCGCCATC GGCCAGAAGG GCTCCACCAT CGCGGCCGTC
AAGGGCGCGC TGGAGGAGGC CGGGGCGATG AAGTACACGA CCATCGTCGC CGCTCCCGCC
TCCGACGCGG CCGGCTTCAA GTACCTGGCG CCCTACACCG GCTCGGCCAT CGGCCAGCAC
TGGATGTACG ACGGCAAGCA CGTCCTGATC GTCTTCGACG ACCTGACCAA GCAGGCCGAG
GCCTACCGCT CGATGTCGCT GCTGCTGCGC CGCCCGCCGG GGCGCGAGGC CTACCCCGGC
GACGTCTTCT ACCTGCACTC CCGTCTGCTG GAGCGCTGCG CGAAGCTGAA CGACGAGATG
GGCGGCGGCT CCATGACCGG TCTGCCGGTC ATCGAGACCA AGGCCAACGA CATCTCGGCG
TTCATCCCGA CCAACGTCAT CTCCATCACC GACGGTCAGT GCTTCTTCGA GACCGACCTG
TTCAACTCCG GCGTCCGCCC GGCGATCAAC GTGGGTACCT CGGTCTCCCG CGTCGGCGGC
TCGGCGCAGG TGAAGGCGAT GCGCTCGGTC TCCGGCTCGC TGCGCGTGGA CCTGGCGCAG
TTCCGCGACC TGGAGGCGTT CGCCGCCTTC GCCTCGGACC TGGACGACGC CTCCAAGGCC
CAGCTCGCCC GCGGCCAGCG CATGGTGGAG ATCCTCAAGC AGGGCCAGTA CGAGCCCTAC
CCGGTCGAGG AGCAGGTGGC CTCGATCTGG ATCGGCACCT CGGGCTCGAT CGACGACGTG
CCGGTGGCCG ACGTGCGCCG CTTCGAGAAG GAGTTCGTCT CCTACCTCAA GACCGACCAC
TCCGGCGTCC TGAACTCCAT CCGCGAGACC GGCCAGCTCT CCGACGACAC CGTCTCGGCG
TTCAAGGACG CGGTCGCGCA GTTCAAGCGC GGCTTCGAGC TCGGCGACGG CACGCTGCTG
GCCGACCAGG GCAAGGCCGA GGCGATGGAC GAGGGCGACG TCGGCCAGGC CACGATCACC
AAGCACAAGG CCTGA
|
|---|
| Protein sequence | MTELTIRPEE IRDALERFVA SYEAPEASKD EVGTVTEIGD GIAKVEGLPS AMTNELLKFE
DGTLGIALNL DVREIGVVVL GDYEGIEEGQ RVARTGEILS TPVGDSFMGR VVNPLGEPID
GLGPIEAEGT RILELQAPGV MARQSVKEPL QTGIKAIDSM TPIGRGQRQL IIGDRQTGKT
AVAVDTIINQ KQNWESGDPK KQVRCIYVAI GQKGSTIAAV KGALEEAGAM KYTTIVAAPA
SDAAGFKYLA PYTGSAIGQH WMYDGKHVLI VFDDLTKQAE AYRSMSLLLR RPPGREAYPG
DVFYLHSRLL ERCAKLNDEM GGGSMTGLPV IETKANDISA FIPTNVISIT DGQCFFETDL
FNSGVRPAIN VGTSVSRVGG SAQVKAMRSV SGSLRVDLAQ FRDLEAFAAF ASDLDDASKA
QLARGQRMVE ILKQGQYEPY PVEEQVASIW IGTSGSIDDV PVADVRRFEK EFVSYLKTDH
SGVLNSIRET GQLSDDTVSA FKDAVAQFKR GFELGDGTLL ADQGKAEAMD EGDVGQATIT
KHKA
|
|---|
| |