| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1212 |
|---|
| Symbol | |
|---|
| ID | 8332547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1368312 |
|---|
| End bp | 1369163 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644954359 |
|---|
| Product | F0F1 ATP synthase subunit A |
|---|
| Protein accession | YP_003111978 |
|---|
| Protein GI | 256390414 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
|---|
| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTTA GCCTTGCCAG CGGCACGGTC CTGGCCGCGG ACAGCGGCAC GGGCTGCGGT
AGCGGCACGC CGCACCTGTT CGGGAACAAC GGGGGCTTCT CCTGCGTCTC GCCGAGCTCG
GAGGACTTCG ACTTCGCCAG CCGTCCCGCG TTCCACATCT TCGGCTACGG CGTCACCAAG
CCGACCCTGA TCGTCGCGCT GATCGTGGTC CTGATGATCA CGTTCTTCTG GGTCGCGTTC
AACAAGCCCA AGATGGTCCC GCGCGGCGTG CAGAACGTCG GGGAGGTGGC CTACCTGTTC
GTGCGCGACC GCATCGCGCG CGACTCGATG GGCAAGCAGG GCGACAAGTA CGTGCCCTTC
CTGTTCACCC TGTTCTTCTT CGTCTGGCTG ATGAACGTCA TGTCGTTCGT CCCGGTGGTC
CAGTTCCCGG TGAGCTCGGT CTACGCCTTC CCGCTGGCCC TGGCCATCAT GGTCTGGCTG
ACCTACATGT ACGCCGGCTT CAAGCGGCAC GGCCTGGGCT ACTTCCGGGT CCTCGGCGTC
CCGAGCGGGG TGCCGATCGG CATCCTGGTC ATCCTGACCC CGATCGAGCT GCTGTCGAAC
ATCTTCATCC GGCCGTTCAC CCTGGGTATC CGGCTCTTCG CGAACATGTT CGCCGGCCAC
CTGCTGCTGG CCACGTTCTC CGCCGGCGCC TGGTACATGT TCAGCGTCAA GGGGATCGTC
TTCTCCGGCG CGTCCTTCAC CATGGCGATC GTGATGACCG GCTTCGAGCT GTTCATCCAG
GCGCTGCAGG CCTACATCTT CGTGATGCTG ACCGCGAGCT ACCTGCAGGG TGCGCTCGAG
GAAGCGCACT AG
|
|---|
| Protein sequence | MSLSLASGTV LAADSGTGCG SGTPHLFGNN GGFSCVSPSS EDFDFASRPA FHIFGYGVTK
PTLIVALIVV LMITFFWVAF NKPKMVPRGV QNVGEVAYLF VRDRIARDSM GKQGDKYVPF
LFTLFFFVWL MNVMSFVPVV QFPVSSVYAF PLALAIMVWL TYMYAGFKRH GLGYFRVLGV
PSGVPIGILV ILTPIELLSN IFIRPFTLGI RLFANMFAGH LLLATFSAGA WYMFSVKGIV
FSGASFTMAI VMTGFELFIQ ALQAYIFVML TASYLQGALE EAH
|
|---|
| |