Gene Caci_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1206 
Symbol 
ID8332541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1361730 
End bp1362641 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content72% 
IMG OID644954353 
Productmodification methylase, HemK family 
Protein accessionYP_003111972 
Protein GI256390408 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGATT CCACTCCGGT GACACAGGAC CCGACGGGCC CGCCCCAGGC CGGGAAGCCT 
CTGTCACTGC TGCGCGCTGA GATCGCGCAG GCATCCTTGC GCCTGGCCGA GGCCGGCGTC
GGTTCCCCGC GCCACGACGC GGAGGAACTG GCGGCCTGGG TCCACGGCGT GCGCCGCACC
GACCTGCACC GCGTCCCCGA CCACGACTTC GACGCGCGGT ACTGGGAGGT CATCGCCCGC
CGCGCGAACC GCGAGCCGCT GCAGCACATC ACCGGTGCGG CCTATTTCAG GTATCTGGAG
CTGGCCGTCG GTCCCGGCGT GTTCGTCCCG CGCCCGGAGA CCGAGGTGAT GGTCGGCTGG
GCGATCGACA AGCTGCGGGC GCTGGACGTC GCCGAGCCGC TGATCGTGGA CCTGTGCACC
GGCTCGGGGG CGATCGCTCT GTCCATAGCG CAGGAAGTCC CGCGCGCCCG CGTGCACGCC
GTGGAGCTGT CAGAGGACGC CTATACCTGG GCCTCTCGCA ACATCGCCGC CTCCGAGGCC
GGCGAGCGCG TGACGCTGCA CCTGGCGGAC GCGGTGACGG CGCTGCCGGA ACTGGACGGC
CGGGTGGACG TGGTGGTGTC GAACCCGCCC TACATCCCGC TGACCGAGTG GGAGTACGTC
GCCCCCGAAG CCCGCGACCA CGATCCCGAA CTGGCGCTGT TCTCCGGTCC GGACGGCTTG
GACCTCATCC GCGGTCTGGA GCGCACGGCG CAGCGGCTGC TCAAGCCCGG CGGCTGGTCG
GCGTTCGAGC ACTCGGACAA GCAGGGCGGC GAGGTGCAGC GCATCTTCTT GGAGGAGCGC
GGCTGGGCCG AGGCGTCGGA CCACCGGGAT CTGACGAACC GGCCGCGGTT CGTGACGGCC
CGCAAGGGCT AA
 
Protein sequence
MSDSTPVTQD PTGPPQAGKP LSLLRAEIAQ ASLRLAEAGV GSPRHDAEEL AAWVHGVRRT 
DLHRVPDHDF DARYWEVIAR RANREPLQHI TGAAYFRYLE LAVGPGVFVP RPETEVMVGW
AIDKLRALDV AEPLIVDLCT GSGAIALSIA QEVPRARVHA VELSEDAYTW ASRNIAASEA
GERVTLHLAD AVTALPELDG RVDVVVSNPP YIPLTEWEYV APEARDHDPE LALFSGPDGL
DLIRGLERTA QRLLKPGGWS AFEHSDKQGG EVQRIFLEER GWAEASDHRD LTNRPRFVTA
RKG