Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1200 |
Symbol | |
ID | 8332535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1354785 |
End bp | 1355840 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644954347 |
Product | threonine synthase |
Protein accession | YP_003111966 |
Protein GI | 256390402 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0498] Threonine synthase |
TIGRFAM ID | [TIGR00260] threonine synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.887008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTGGC GAGGCGTCAT CGAGGAGTAC CGACAGTGGC TGCCGGTCGA CGCCGGCACG CCCGTGGTCA CGCTGGGCGA GGGCGGCACG CCGCTGCTGC CCGCGCCGCG CCTGTCCGCC CTCACCGGGT GCGAGGTGTT CGTCAAGGTC GAGGGCATGA ACCCGACCGG CTCGTTCAAG GACCGCGGCA TGACCACCGC GATCTCGCTG GCCAAGCAGG CCGGCGCCGA GGCCGTGGTG TGCGCCTCCA CCGGCAACAC CAGCTCCTCG GCCGCCGCCT ACGCGGTGCG CGGCGGGCTC AAGCCGGTGG TGCTGGTGCC GGCCGGCAAG ATCGCGCTGG GCAAGCTGGC CCAGGCGCTG GCGCACGGCG CGACCCAGCT GCCGGTCGAG GGCAACTTCG ACGACTGTCT CCGGCTGGCC CGCGAGCTGG CCGCGAAGTA CCCGGTCGCG CTGGTGAACT CGGTGAACCC GGTCCGGCTG CACGGTCAGA AGACCGCCGC GTTCGAGGTC GTCGACGTGC TCGGCGACGC CCCGGACATC CACGCCCTGC CGGTCGGCAA CGCCGGCAAC ATCTCCGCGT ACTGGCTCGG GTATCAGGAG TACGCGAAGG AGGGTCAGGC CTCGCGCACG CCCCGCATGT TCGGCTTCCA GGCCGCCGGC GCCGCCCCGC TCGTGCACGG CGCGCCGGTC CCGGACCCGG ACACCATCGC CACCGCCATC CGCATCGGCA ACCCCGCGTC CTGGGACCTG GCGATCGCCG CGCGCGAGGA CTCCTCCGGC GTCATCGAGG CGGTGACCGA CGAGGAGATC CTCGCCGCGC ACCGTGTGCT CTCGGCCGAG GAGGGCGTGT TCGTCGAGCC GGCCTCCGCC GCCGGCGTCG CGGGCATCCT CAAGCTCGCC CGAGCCGGCC GCCTCGAGTC CGGCAAGCGC ATCGTGGTCA CGGTCACCGG CCACGGTCTG AAGGACCCCG AGTGGGCGGT CAAGGCCGCG CCGCCGCTGC CGGACGCCGT CCCGGCGGAG GTCGCCGCGG TCGCCGAGGC TCTCAGCCTC AGCTAA
|
Protein sequence | MAWRGVIEEY RQWLPVDAGT PVVTLGEGGT PLLPAPRLSA LTGCEVFVKV EGMNPTGSFK DRGMTTAISL AKQAGAEAVV CASTGNTSSS AAAYAVRGGL KPVVLVPAGK IALGKLAQAL AHGATQLPVE GNFDDCLRLA RELAAKYPVA LVNSVNPVRL HGQKTAAFEV VDVLGDAPDI HALPVGNAGN ISAYWLGYQE YAKEGQASRT PRMFGFQAAG AAPLVHGAPV PDPDTIATAI RIGNPASWDL AIAAREDSSG VIEAVTDEEI LAAHRVLSAE EGVFVEPASA AGVAGILKLA RAGRLESGKR IVVTVTGHGL KDPEWAVKAA PPLPDAVPAE VAAVAEALSL S
|
| |