| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1198 |
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| Symbol | |
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| ID | 8332533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1351918 |
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| End bp | 1353315 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644954345 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_003111964 |
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| Protein GI | 256390400 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGAA GCGCGCACCC CGCCGGGCCC CGCTACGCCG ACGTGCTCCC GGAAGGCGGC
CACGGCGCCG CGCCGGCGGA TCTCAACCGG CTGGACCAAA GAATCTGGCC CGGCGGGGTG
GCGCGCGACG CGGAGTCCGG CGCGCTCACC TTCGCCGGCG TCGACGTCCG CGAGCTGGCG
AGCGAGTTCG GCACCCCGGC GTATTTGATC GACGAGGACG ACTGGCGGCG CCGGGCCCGC
GAATGGGTCG AGGCGTTCGG CGCGGACGCC GACGTCTTCT ACGCCGGCAA GTCCTTCCTG
TCCGTGGCGA TCGCCAAGTG GGCCGCCGAA GAGGGACTGC ACCTGGACGT CTGCTCCGGC
GGCGAACTCG CCGTCGCCCT GCGCGCCGGA TTCCCGGCCG AGCGCCTCGG TTTCCACGGC
AACAACAAGT CCGTCGCCGA GTTGGAGCGC GCGGTGGACG CCGGCGTCGG CCGGATCATC
GTGGACTCGC ACGACGAGAT AGAGCGGCTG GCCGCGATCG CCGCCGACCG CGGCGTCCGG
CAGCGCGTCA TGCTGCGCGT GACGCCCGGC GTCGAGGCGC ACACCCACGA GTTCATCGCC
ACCGCGCACG AGGACCAGAA GTTCGGCTTC TCGCTGGCCG GCGGCGCGGC GGCCGAGGCG
GTCGCGCGGC TGCTGAAGCA CGCCGACCAC CTGGAGCTGA CCGGGCTGCA CTCGCACATC
GGCAGCCAGA TCTTCGACAC CGCCGGGTTC GAGGTCGCCG CGCACCGGCT CACCGAGGCG
CTGGCCGCCA TCAAGCGCGA CCACGGCATC GAGCTGCCGG AGCTGGACCT CGGCGGCGGT
CTGGGCATCG CCTACACCGA GGGCGACGAC CCGGCGCCGG TCGCCGAGAC CGCGCGCCGG
CTCAAGGAGA TCGTGGCGCG CGAGTGCGAC GCCGCCGGGC TCACCCGTCC GCGTCTGTCC
GTCGAGCCCG GCCGCGCCAT CGCCGGTCCT CCCGGGATCA CGCTCTACGA AGTCGGCACG
GTCAAGCCGC TGCCTGGCCT GCGCACCTAC GTCTCGGTGG ACGGCGGGAT GTCGGACAAC
ATCCGCACCG CGCTGTACGA CGCCGAGTAC ACCGCCGCGC TGGTCAGCCG GTCCAGCACC
GCCGTGCCGG TGCTCAGCCG GGTGGTCGGC AAGCACTGCG AGTCCGGCGA CATCGTGGTC
CGCGACGCCT GGCTGCCCGG CGACACCGCG CCCGGCGACC TGCTGGCGAT CGCCGCGACC
GGCGCCTACT GCCGCTCCAT GGCCAGCAAC TACAACCACC TGCTCAAGCC GCCGGTGATC
GCGGTCAAGG ACGGCGCGGC GCGCACCATC GTCCGGCGCG AGACGGAGGA CGACCTCCTG
GGACTGGACC TGGGATAG
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| Protein sequence | MSRSAHPAGP RYADVLPEGG HGAAPADLNR LDQRIWPGGV ARDAESGALT FAGVDVRELA
SEFGTPAYLI DEDDWRRRAR EWVEAFGADA DVFYAGKSFL SVAIAKWAAE EGLHLDVCSG
GELAVALRAG FPAERLGFHG NNKSVAELER AVDAGVGRII VDSHDEIERL AAIAADRGVR
QRVMLRVTPG VEAHTHEFIA TAHEDQKFGF SLAGGAAAEA VARLLKHADH LELTGLHSHI
GSQIFDTAGF EVAAHRLTEA LAAIKRDHGI ELPELDLGGG LGIAYTEGDD PAPVAETARR
LKEIVARECD AAGLTRPRLS VEPGRAIAGP PGITLYEVGT VKPLPGLRTY VSVDGGMSDN
IRTALYDAEY TAALVSRSST AVPVLSRVVG KHCESGDIVV RDAWLPGDTA PGDLLAIAAT
GAYCRSMASN YNHLLKPPVI AVKDGAARTI VRRETEDDLL GLDLG
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