Gene Caci_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1196 
Symbol 
ID8332531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1349792 
End bp1350151 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content71% 
IMG OID644954343 
Productresponse regulator receiver protein 
Protein accessionYP_003111962 
Protein GI256390398 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGACG ACAGCGACAC CGTCAGGACC CTGATCCGCA TCAACCTGGA GTTGGAAGGC 
TTCGAGGTGC AGGAGGCCGA CTCGGGAACC CGGTGCCTGG AACTGGTGCC GGGACCCGAT
GTCGTGACCC TCGACCTGCT CCTGCCCGAG ACCGGTCCCG ACGGGCTGGA CATCCTGCGC
CGGCTCAAGC GCGACCCGGC GCTGGGGCGT CCGCGCGTGG TGGTGGTGAC GGCCGCCGCG
CTGCCGGAGG ACCGGCGGCT CGGGGAGTCG GCCGGCGCCG ACGCCTACAT CACCAAGCCC
TTCGAGCCGG TGGAGTTGGT GGACGCGGTG CGGGCGTTGG CATCCCCGGA CCGTTTCTGA
 
Protein sequence
MVDDSDTVRT LIRINLELEG FEVQEADSGT RCLELVPGPD VVTLDLLLPE TGPDGLDILR 
RLKRDPALGR PRVVVVTAAA LPEDRRLGES AGADAYITKP FEPVELVDAV RALASPDRF