Gene Caci_1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1195 
Symbol 
ID8332530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1348412 
End bp1349731 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content71% 
IMG OID644954342 
Producthypothetical protein 
Protein accessionYP_003111961 
Protein GI256390397 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCC AGGGATTCGA GGACATGGAC GGCGGCGGTC TCGACGGGAC CGGTGAAGCC 
GGCGGTCCGG GCAGCCGGGC TAGCGAGACC TCCAGCGGGG CGCGGAGCGG TCAGACGTCG
GGGGATCAGG TGGCTGCGTA CGCCGCGGAG GTGCGGGCGC AGCTGGCTGA TTTGTCTGAC
GCGGAGAGCG CTGAGCTGCT GGAGGACCTG GAGGATCATC TGCGGGAGGT TGCCGCGGAG
GGTGCTGGGA GCTTGCGGGA GCGGCTTGGT GCGCCGGGGG CTTATGCCAG GGAGCTGCGG
CAGGCGGCTG GGTTGCCGGA GCCGGGTGAG GGGAGCGGCT CGGGGAGTGC TGGGCGGGGG
GCTCGGTCGC GGCCGTCGGT GCGGGTGAGG GTGCGGCAGG CGTTGGTGGA CGCGGAGCGT
CGGGCGCGGG GTCATCGGGC GGGGCGTGAG GTGCTCGATT TCCTGCCCTC GCTGCGTCCA
GCTTGGTGGG TGCTGCGGGG GTGGGCAGCG GTGCGGCTTC TGGAGGTGAT GACGACGGAT
GTGGATCCCT GGCACGATTT CGCGCTTGTC CCGCAGGTCG GCAACAGCAC GGTGATCGGG
TTTCTCGCAC TGGCGGCCGC GGTGCCGGCG TCGGTGTACG CCGCGCGGCG GACGGTGCCC
GACGGGTGGC GCCGCCGTGC CGTGGGTGCC GGAGAGGGCA TCTTGGTCCT GTTCACCATC
GGGATGGCGC TCTCGGCGCT GAGCACTCAG AGCAACTACG GCGAGAACGC CTCGAGCGTC
GCCTTCGACC AGGGCGGATC GCTGCCCGGC CTGGTCGACA ACGGCAAGCC CATCTCGAAC
CTGTACGTCT ACGACCGGGC CGGCAAACCG CTCGACGGCG TCCTCGTCTA CGACCAGGAC
GGTCAGCCGA TCCAGGCAGA CGTGTACGCG GGCGGCTCGA TCCTGGACAA CGACGGGTGG
ATCGACGGCA ACGGGTCGCT CGTGGCGAAC ATCTTCCCGC AGCAGATGTT GCAGACGCAG
TGGGACGATT CCGCCGGCGG CGCGCACTAC GTCGTGATGC CGCCGCCGGA GGTGAACATC
CCGCAGGGTC TGCACCGGGC GTCGGCGCCG CAGGGGGCAC AACAGAGTCC TGCGACGCCC
ACGACGGCGC CCACGACGAC ACCGCCGACA ACACCCACGA CCACACCCTC GACCACATCT
TCCACTCCCG GACCTCAGGC TTCATCGCCG ACGAGCGCCA CGCCGACCAG TGGCGCCACC
GGAGCGCAGC CGACATCCGC GCTCCCGTCG ACTCCGGCGC CCTCCGGCAC GAAGGGTTGA
 
Protein sequence
MSSQGFEDMD GGGLDGTGEA GGPGSRASET SSGARSGQTS GDQVAAYAAE VRAQLADLSD 
AESAELLEDL EDHLREVAAE GAGSLRERLG APGAYARELR QAAGLPEPGE GSGSGSAGRG
ARSRPSVRVR VRQALVDAER RARGHRAGRE VLDFLPSLRP AWWVLRGWAA VRLLEVMTTD
VDPWHDFALV PQVGNSTVIG FLALAAAVPA SVYAARRTVP DGWRRRAVGA GEGILVLFTI
GMALSALSTQ SNYGENASSV AFDQGGSLPG LVDNGKPISN LYVYDRAGKP LDGVLVYDQD
GQPIQADVYA GGSILDNDGW IDGNGSLVAN IFPQQMLQTQ WDDSAGGAHY VVMPPPEVNI
PQGLHRASAP QGAQQSPATP TTAPTTTPPT TPTTTPSTTS STPGPQASSP TSATPTSGAT
GAQPTSALPS TPAPSGTKG