Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1194 |
Symbol | |
ID | 8332529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1348080 |
End bp | 1348415 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644954341 |
Product | transcriptional regulator, PadR-like family |
Protein accession | YP_003111960 |
Protein GI | 256390396 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCCA CACAACTGCT CAAAGGCGTC CTGGACTCGG CGGTGCTCGC GGTCCTGGTC GACGAGGACG GCTACGGCTA CGACATCGTG CGCCGGCTGC GGGTCGCCGG CTTCGAGGAC ATCGGCGACG CCTCGGTCTA CGGGACGCTG CGGCGCTTGT ACGCCAACGG ATATCTGACG AGCTACGTGG TGCCCTCGGA GTCGGGGCCG CACCGCAAGT ACTACGGCGT GAACGCCAGC GGGCGCGCGC AACTGAAGGA GTCCACGGCC ACCTGGCGCG CGTTCGCCAG CTCCATGGAC CGGCTGCTCG GAGCGGAGAG GGGAGAGCGG GTATGA
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Protein sequence | MDSTQLLKGV LDSAVLAVLV DEDGYGYDIV RRLRVAGFED IGDASVYGTL RRLYANGYLT SYVVPSESGP HRKYYGVNAS GRAQLKESTA TWRAFASSMD RLLGAERGER V
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