Gene Caci_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1194 
Symbol 
ID8332529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1348080 
End bp1348415 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content68% 
IMG OID644954341 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003111960 
Protein GI256390396 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCCA CACAACTGCT CAAAGGCGTC CTGGACTCGG CGGTGCTCGC GGTCCTGGTC 
GACGAGGACG GCTACGGCTA CGACATCGTG CGCCGGCTGC GGGTCGCCGG CTTCGAGGAC
ATCGGCGACG CCTCGGTCTA CGGGACGCTG CGGCGCTTGT ACGCCAACGG ATATCTGACG
AGCTACGTGG TGCCCTCGGA GTCGGGGCCG CACCGCAAGT ACTACGGCGT GAACGCCAGC
GGGCGCGCGC AACTGAAGGA GTCCACGGCC ACCTGGCGCG CGTTCGCCAG CTCCATGGAC
CGGCTGCTCG GAGCGGAGAG GGGAGAGCGG GTATGA
 
Protein sequence
MDSTQLLKGV LDSAVLAVLV DEDGYGYDIV RRLRVAGFED IGDASVYGTL RRLYANGYLT 
SYVVPSESGP HRKYYGVNAS GRAQLKESTA TWRAFASSMD RLLGAERGER V