| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1179 |
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| Symbol | |
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| ID | 8332514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1328721 |
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| End bp | 1329707 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644954326 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003111945 |
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| Protein GI | 256390381 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGATATC TTCTGCGCCG AGTAGGGTTC TTCCTTCTCA CCCTCTGGGC CGCCCTCACG
CTGAACTTCT TCCTGCCGCA CTTCATGCCC GGCAGCCCGA TCAACACCCT GCGCGCGCAG
ACGAAGGGCC GGGTCTCCGA CGCCCAGCTG CAGCAGATCC TGACCTCCTT CGGCTACAAG
CCGCACGAGA ACATCGTCCA GCAGTACGTC GACTACCTGG GCAACATGAT CACCGGCAAC
TGGGGCGTGT CCCTGGGCAG CTCGCTGGGC ACGCCGGTGT CGAAGCTGAT CGGCCAGTCG
CTGCCGTGGA CGCTGGGCCT GGTGGGCTTC ACCACGATCC TGGCGTTCCT GCTCGGCTCG
CTGATCGGCA CCATCGCCGC CTGGCGCCGC GGCGGCGTCG TGGACTCGGT GCTGCCCTCG
GTCTTCGTGG TGACCAGCGC GCTGCCCTAC TTCGTGGTCG GGCTGTTCCT GATCCTGTTC
CTGACGGTGG ACAACACCTG GCTGCCCTCC TCGGGCAACT ACGACACCTC GATCGTCGCG
GGCTTCTCGC CCGGCTTCGT CGGCAGCGTC CTGAAGTTCG CGCTGCTGCC GGCGCTGACG
CTGCTGATCA CCTCGATCGG CGGCTGGGTG CTGACCATGC GCAACAACAT GATCACCACC
CTGGCCGAGG ACTACATCCG GATGGGGCGG GCCAAGGGGC TCTCGGACCG CAAGGTGATG
ATGAACTACG CCGCGCGCAA CGCCTTCCTG CCCAACCTGT CCGGCTTCGC GATGTCGATC
GGCTTCGTGC TCACCGGCGC GATCCTGGTC GAGAAGATCT TCAACTATCC CGGACTGGGC
TACCAGCTCT ACAACGCCGT CAACAGCATC GACTACCCGA TGATGCAGGC ACTGTTCATG
TTGTTCACGG TGGCGGTGCT CGGCGCCCTG TTGATCTGCG ACCTGGTCAC CGTGTGGCTG
GACCCGCGTA CCCGGGCGAA GGGGTGA
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| Protein sequence | MRYLLRRVGF FLLTLWAALT LNFFLPHFMP GSPINTLRAQ TKGRVSDAQL QQILTSFGYK
PHENIVQQYV DYLGNMITGN WGVSLGSSLG TPVSKLIGQS LPWTLGLVGF TTILAFLLGS
LIGTIAAWRR GGVVDSVLPS VFVVTSALPY FVVGLFLILF LTVDNTWLPS SGNYDTSIVA
GFSPGFVGSV LKFALLPALT LLITSIGGWV LTMRNNMITT LAEDYIRMGR AKGLSDRKVM
MNYAARNAFL PNLSGFAMSI GFVLTGAILV EKIFNYPGLG YQLYNAVNSI DYPMMQALFM
LFTVAVLGAL LICDLVTVWL DPRTRAKG
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