Gene Caci_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1175 
Symbol 
ID8332510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1324025 
End bp1325101 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content73% 
IMG OID644954322 
Producthypothetical protein 
Protein accessionYP_003111941 
Protein GI256390377 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCCA CCGCGATCGA CGTGACCCCG CACCCCGACC TGACCGCCGA CGGCATCGTC 
GCGGTCGCCG CCGCCACGCG GGACGCCTGG CGCGCGATCG CCTTGTCCAC CGAGGCTGTC
GACCGGCAGG CGACCGAGGA GACGGTGCTC CGGCTCTACG CCGAGTCCCT GCCGGACTCG
GCGCCGCCGG AGATCATCTG GTGCCGCTCC CCCTTGGAAG CCGCGCGCCT GGTGGCCGCC
GACGCCGAGC GCCTCGGCGC CCCCGCGCGC GACCGTGTCA GGGACCTGAC CTGGTCGGTG
GGCCGCGCCC GGCTCGCCGA ACGCCTCGGC CCGCGCGAGT TCGGCCGGGT CTGGCAGGCG
GCGTGCGGCG ACCTCGCCCC GCTGATCAGC ACCCTGATCG CGCGCATCGC CACCGCCGTG
GAGGAGCACG CCGATCCCGA GGACATCGCC GAGCGCACCG CCCTGCGCAT CGCCCTGACC
CACGCTGTCC ACGGCCAGTT CGACGCCTCC TGGCTCCCGC TCTACGAAGC CTCCGGCATG
GCGTGCGGCC TGGGCCGGAT GGCGCGCTCG GCGGGCTGGT GGTGGCCGTT CGAGAACGCG
GTCATCCTCA CCGAGCGCCC GCTCGCGCTC CGCCTGGACG ACCAGGATCG GCTGCACCAC
GGCGACGGAC CCGCGCTGGT CTACGCCGAC GGCTTCGCCG TGTACTCCTG GCGCGGCACT
CCGCTGACCG AGGAGTTCGG CCGGCGCCTA GCCGCGACCA GCCCGGACAC CATCCGCGCG
GAGGAGAACG CCGAGCTGCG CCGGATCATG GTCGAGCACT ACACGCCGGA GCGCTTCCTG
AAGGAGTCCG GCGCGCAGCC GGTCCAGGAG GACGAGGCCG GCAAGCTGTG GCGGATCGCG
ATGGGCGACG ACGAGTCCAT CGTCCTGGTC GAGGTGGTGA ACTCCTCGCC GGAGCCGGAC
GGCACGTTCA ACGTCTACTT CCTGCGCGTG CCGCCCAGCA TGCTGACCGC GAAGGCCGGC
GTCGCCTGGA CCTTCGGCCT CACCGAGGAC GAGTACCAGC CGCTCCGGCA GACTTGA
 
Protein sequence
MPATAIDVTP HPDLTADGIV AVAAATRDAW RAIALSTEAV DRQATEETVL RLYAESLPDS 
APPEIIWCRS PLEAARLVAA DAERLGAPAR DRVRDLTWSV GRARLAERLG PREFGRVWQA
ACGDLAPLIS TLIARIATAV EEHADPEDIA ERTALRIALT HAVHGQFDAS WLPLYEASGM
ACGLGRMARS AGWWWPFENA VILTERPLAL RLDDQDRLHH GDGPALVYAD GFAVYSWRGT
PLTEEFGRRL AATSPDTIRA EENAELRRIM VEHYTPERFL KESGAQPVQE DEAGKLWRIA
MGDDESIVLV EVVNSSPEPD GTFNVYFLRV PPSMLTAKAG VAWTFGLTED EYQPLRQT