| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1157 |
|---|
| Symbol | |
|---|
| ID | 8332492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1302318 |
|---|
| End bp | 1303013 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644954305 |
|---|
| Product | ThiJ/PfpI domain protein |
|---|
| Protein accession | YP_003111924 |
|---|
| Protein GI | 256390360 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGA TCCTGATGGT TCTGACCGGT GCCGACTCCT GGACGCTGAA GGACGGCACG
AAGCATCCGA CCGGCTTCTG GGCCGAGGAG GCGGTGGTGC CCTACCAGGC GCTGACGGCC
GCCGGGCACG AGGTGACGGT CGCGACTCCC GGCGGCGTGG TGCCGACCGT GGACGCCGGC
AGCCTGTCGG CGCAGTTCAC CGGCGGCGAG GAGGGCGCGC GGCAGATGTC CGACGCGCTC
GCGGCGATGG CCGGGCTGCG CAGTCCCGTC GCGCTGGCCG ACGTCTCGGT CGGCGACTAC
GACGCGGTGT TCTACCCCGG CGGGCACGGC CCGATGGAGG ACCTGGCCGA GGACGCCGAG
TCCGGCCGGC TGCTCACCGC GGCGCTGGGC TCCGGCAAGC CGCTCGCGGT GGTCTGCCAC
GGTCCGGCGG CGCTGCTCGC GGCGCACGGC GTGGACGGCG TGTCGGCGTT CGCCGGCTAC
CGCGTCGCGG CGTTCACCAA CGAGGAGGAA GCCCAGGGCG GTCTCGCCGA CAAGGCGAAG
TGGCTGCTGG AGGACCGCCT GGTCGCCGAC GGCGTGGTGG TCGACAAGGC CGCGCCGTGG
ACGCCGCACG TGGTCGTGGA CCGGAACCTG ATCACCGGGC AGAACCCGAT GTCGTCCGCT
CCGTTGGCGG CGGAGCTGCT GAAGGCTCTT GGCTGA
|
|---|
| Protein sequence | MAKILMVLTG ADSWTLKDGT KHPTGFWAEE AVVPYQALTA AGHEVTVATP GGVVPTVDAG
SLSAQFTGGE EGARQMSDAL AAMAGLRSPV ALADVSVGDY DAVFYPGGHG PMEDLAEDAE
SGRLLTAALG SGKPLAVVCH GPAALLAAHG VDGVSAFAGY RVAAFTNEEE AQGGLADKAK
WLLEDRLVAD GVVVDKAAPW TPHVVVDRNL ITGQNPMSSA PLAAELLKAL G
|
|---|
| |