Gene Caci_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1138 
Symbol 
ID8332473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1285294 
End bp1286100 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content69% 
IMG OID644954286 
Productprotein of unknown function DUF574 
Protein accessionYP_003111905 
Protein GI256390341 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGG CGGGTTGGAC TTCGCCGGAA GTGGACACCG AGGTCGCCAC ACCGGCGCGC 
ATGTACGACT ATTACTTGGG TGGCAAGGAT AATTTCCCCG CCGACCGCGA GGCCGCCGAG
AAGGTCCTGA AGAACATGCC GAAGGTGCGG GCGTTCGCGC GCGCCAATCG GGCGTTCCTG
GGGCGCGCGG TGCGGAGCAT GGCGGCGGAG AACATATCGC AGTTCCTTGA TGTCGGCATC
GGGTTGCCCG GGCCCGGCGG GACGGTTGCT AGCGCGCTGG CGGCGCGTCC GGACGCGCAT
GTCGTGGGTG TCGACAACGA TCCGATCGTG TTGGCCCACG CCCGGGCCCG GCCGGTCAAC
GCCGGCGGCG GCGCGGCGAC GATCGTGGCC GGAGACCTGC GCGACCCGGC GGCGATCCTG
GCCGATCCGC AGGTGCGCGC GATGCTCGAC TTCGAGCGTC CGATCGGCGT GATGCTGATC
GCGGTCCTGC ACTTCGTTTC CGACGACGAG AAGCCCTACG ACATCGTCAA GACCCTGATG
GACGCCGTCG CCCCCGGCAG CTACCTCGCC CTGACCCACG TCACCGGCGA CTTCGATCAG
GAACGACTCG CGGTTTCGGC GCAGGCGTAT GAGAAGTCGA CGGCGAAGCT CACAGTCCGC
AGCGCCAAGG AGACCGCCGC CTTCTTCGAC GGCATGGACC TCCTCGATCC CGGTGTGGTG
CTCCTCCCGC GCTGGCGCCC CGACGGCCCG GTCCCCGCCG ACGCCGACGA CATCTGGATG
TACGGGGCGC TCGGGCGCAA GGGCTGA
 
Protein sequence
MSEAGWTSPE VDTEVATPAR MYDYYLGGKD NFPADREAAE KVLKNMPKVR AFARANRAFL 
GRAVRSMAAE NISQFLDVGI GLPGPGGTVA SALAARPDAH VVGVDNDPIV LAHARARPVN
AGGGAATIVA GDLRDPAAIL ADPQVRAMLD FERPIGVMLI AVLHFVSDDE KPYDIVKTLM
DAVAPGSYLA LTHVTGDFDQ ERLAVSAQAY EKSTAKLTVR SAKETAAFFD GMDLLDPGVV
LLPRWRPDGP VPADADDIWM YGALGRKG