Gene Caci_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1130 
Symbol 
ID8332465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1274638 
End bp1275705 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content69% 
IMG OID644954278 
Productbeta-lactamase 
Protein accessionYP_003111897 
Protein GI256390333 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGTC TTGCCACGAG GATCGGCGAT CTCGTCGAAG GCGGTGTCGA GCAGCGGGTC 
TTCCCCGGCG CGGTGTGGGC TGTCGGCGGT CCGGACGGGG TGCTGGAGCA AGGTGCGACG
GGGCTGCTCG ATCCGCGGGA CGCGTCGCGG CCGATGCGGG CGGACACGCT GTTCGACCTC
GCCAGTCTGA CGAAGATCAT CGCGGTGTGG TCCGGCGTCG GGATGCTCTG GGAGCACGCG
CAGATCGACC TCGATGACCC GCTGGCCAAG CACCTTCCGG ACGCGGCGGG TTTTCCTTTG
GGCGCCGTCA CGATCCGCCA GTTCCTGACC CACACCTCAG GCGTCCCGCT GCGCGCGAAC
CTGCGTGCGT CGTACGGCAC CGACCCGGAC GCGGTGCGGC TCGGCGTGTT GCGGGAAGCG
ATGCGTCGAC CCGCTGGTGA AGCCGTCGAA TACACCGACC GCTCGGCGCT GATCCTGGGG
TTCCTGGTCG AGCAGCTGAT GGATCGGCGC CTGGACGAGG TCGCCCGGGA CACCGTGTGG
ACGCCGCTCG CCATGACGGC GACGCGCTAC GGACCGGTCC CGTCCGACCT CATTGCGCAG
AGCGCGCCGA CGGAGTTCGA CGACGAGACC GGCGAATACG TGCGCGGCTC CGTGCACGAC
TACTCCGGAC GGTTGCTCGG CGTCTGCGGC ATCTCCGGAA CCTTCTCGCA CGCTCAGGAC
TTGGGCCGCT TCCTGAAACA CCTGCTCAAC CCGGCAGCCA GTGTCGGCGC GGTCGGCACT
ATCGGCACGG TCGGCTTCGG TCAGCGCTGG ATCGCCGAAT CGCTCCGCCT GCACACCGTC
GCCCTGGATC CGGCACGCGG CTTGTTCTGG GTCCCCTCGC CGAAGACCGC CACCGGCGAA
GCAGACGTCT GGCTCCACTA CGGCTTCACC GGCACCGGTA TGTGGGTCTC GCCGTCGCGC
GAGCGCTGGG CGGTACTGCT GACGAACAAG GTCTACTACA GCCGCGATCG CGGGCCGATG
GCTGCCGTGC GGAACGAGTT CCGGCGGCTG GTGTTCGGCC CGAGCTGA
 
Protein sequence
MDSLATRIGD LVEGGVEQRV FPGAVWAVGG PDGVLEQGAT GLLDPRDASR PMRADTLFDL 
ASLTKIIAVW SGVGMLWEHA QIDLDDPLAK HLPDAAGFPL GAVTIRQFLT HTSGVPLRAN
LRASYGTDPD AVRLGVLREA MRRPAGEAVE YTDRSALILG FLVEQLMDRR LDEVARDTVW
TPLAMTATRY GPVPSDLIAQ SAPTEFDDET GEYVRGSVHD YSGRLLGVCG ISGTFSHAQD
LGRFLKHLLN PAASVGAVGT IGTVGFGQRW IAESLRLHTV ALDPARGLFW VPSPKTATGE
ADVWLHYGFT GTGMWVSPSR ERWAVLLTNK VYYSRDRGPM AAVRNEFRRL VFGPS