| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1126 |
|---|
| Symbol | |
|---|
| ID | 8332461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1270870 |
|---|
| End bp | 1272552 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644954274 |
|---|
| Product | copper resistance protein CopC |
|---|
| Protein accession | YP_003111893 |
|---|
| Protein GI | 256390329 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1276] Putative copper export protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGTC GCTTCGCGTG GGTGGTCGCG GTCGTCGTCG TGGTGCTTGT CGCCGTGGCG
CCGTCCGCGT CCGCGCATGC CACGGTGGTC TCCACGTCGC CGAGCGACGG CCAGGTCGTG
GCTGCCGCGC CGAGCGTGGT GTCGGTGCGG TTCGACGAGC CGGTGCAGAT GCAGTTCGGG
GCGCTGCGGG TGTTCTCGCC GTCCGGGGCG CGGGTGGACG AGGGCACTCC GTCGCATCCG
CCGGGGCATT CGGACACTGT GCAGGTCGCC GTGGGCTCGA ACCTGGGTCG CGGTACGTAC
ACGGTCGCCT GGCATGTGAT CTCGGCGGAC TCGCATCCGG TGTCGGGGGC GTTCACGTTC
AGCGTCGGCG CGTCGTCGTC GACCTCGGTG CCGCAGGACA CGTTGAACGC TGCTGGGAGC
AAGGCGGTCG GGGTCCTTTA TGGGTTCGCG CGCGGGACTG CTTATGGCGG CTTCGCGCTG
ATGGTCGGTG CCACTGCGTT TCTGCTCTGC TGCTGGCCGA CGGGAGCCGC TTCGCGCCGG
GTGCGGGTCG TGATCGGCGG AGGCTGGGCT GCGTTGGTGG TCGCGACGTT CGCCGTGCTC
GGGTTGCAGG GTCCTTATGA CGGCGGCTTC GGGCTGAGCC GGGTCTTCGA CAGCGCGGTG
CTGCACACCA CGCTCGGGAC TCGACTCGGC ACGGCGCTGG CGGTGCGGTT GCTCCTGCTC
GGAGCGGCTG GCATCGGGTT GGTGTTGTTG CTGCCGCGGA TCGCGGGGGC TTCGGACCGG
CTGCGGATCA CGGCGGTTGC GGTCGGGGCG GCGCTGGCTG TCGCGATCGC GGCGACGTGG
GCTACCGCCG ACCACGCCGG GACCGGTTCG CAGGTCGCGC TCGCGCTGCC GCTGGACGTC
GTGCACGTGA TGGCGATGGC GGTGTGGCTC GGCGGGCTGA CGGTCGTGGT CGCGGTGTTG
CTGCGGCCGG CGGGCGCCGA GGTGCCGGTG CTGGCGGCGG CGATCCGGCG GTTCTCGACC
ATCGCGCTGT GCTGTATCGG CACGTTGGTC GCCAGCGGCA CGTATCAGGC GTGGCGCCAG
GTCGGGACGC TGGGAGCGCT GACCGGCACG GTTTACGGCA GGCTGTTGCT GTTCAAGCTG
CTCGGGGTCG GGCTGCTGAT CGGGCTGGGC TATCTGGCGC GGGTGTGGAT CGCGCACTAC
CTGGCCGGTC CCGCGATGAA GGCCGACGCG GTGGCCATCC GGCAGCTGCG GCGCTCGACC
GGTATCGAGG TCGTGTTCGC CACCGGCGTG CTCGCCATCA CGGCGATGCT GGTGAACGCC
CCGCCCGCGC GGACCGCGTA CGCGGCGCCG GTCTCGACGA CGGTCGCCTT CGACGCCGGC
GGTCCGAAGG GGAAGGGCAG CGTGCAGATC TTCGTCTCGC CCGCGAAGGC CGGCACCGAT
CTCGTGCACA TCGAGACGGT CTCCGCCTCG GGTGAGGCGG AGGTGGTGGC GCAGCTGACC
GCGACGATGT CGTTGCCGGA TCGGCAGCTC GGTCCGCTGC CGCTGAACCT GGACGGAGCG
GGGACGGAGC ACCATTACGG GAACGTCGCG ATTCCGTTGC CGGGCAAGTG GATCATGGCG
GTGACGGTGC GGACCGACGA CATCGATGAG ACGACGGTGC AGGTGCCGAT CACTATTCGG
TGA
|
|---|
| Protein sequence | MTRRFAWVVA VVVVVLVAVA PSASAHATVV STSPSDGQVV AAAPSVVSVR FDEPVQMQFG
ALRVFSPSGA RVDEGTPSHP PGHSDTVQVA VGSNLGRGTY TVAWHVISAD SHPVSGAFTF
SVGASSSTSV PQDTLNAAGS KAVGVLYGFA RGTAYGGFAL MVGATAFLLC CWPTGAASRR
VRVVIGGGWA ALVVATFAVL GLQGPYDGGF GLSRVFDSAV LHTTLGTRLG TALAVRLLLL
GAAGIGLVLL LPRIAGASDR LRITAVAVGA ALAVAIAATW ATADHAGTGS QVALALPLDV
VHVMAMAVWL GGLTVVVAVL LRPAGAEVPV LAAAIRRFST IALCCIGTLV ASGTYQAWRQ
VGTLGALTGT VYGRLLLFKL LGVGLLIGLG YLARVWIAHY LAGPAMKADA VAIRQLRRST
GIEVVFATGV LAITAMLVNA PPARTAYAAP VSTTVAFDAG GPKGKGSVQI FVSPAKAGTD
LVHIETVSAS GEAEVVAQLT ATMSLPDRQL GPLPLNLDGA GTEHHYGNVA IPLPGKWIMA
VTVRTDDIDE TTVQVPITIR
|
|---|
| |