Gene Caci_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1110 
Symbol 
ID8332445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1254154 
End bp1254927 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content71% 
IMG OID644954258 
ProductActivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_003111877 
Protein GI256390313 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0474117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACC CCTTCGAGAT CGAGCTCGAA ACCACGCTGC CGGCCACCCC CGAGCAGGTC 
TGGGACGCGA TCGCCACCGG GCCGGGAGTC GACTCCTGGT TCATGGGACG CAACGAGATC
GAGGCGCGGG AAGGCGGAAC CGCCGCCATG GACACCGGCG GCTACCGGGA GGAGGCCGTG
GTCACCGCCT ACGACCCCGG CAAGCGCCTG GCGACCCGCA CCTCCCCCGA CGCCGACGGC
CGCTTCATGG CCTTCGAGTA CCTGCTTGAG GGACGGGAGG GCGGCAGCAC CGTCCTGCGC
GTCGTCCACA GCGGCATGCT CGGCGACGAC TGGGAGAACG AATACGACGC CCTGCGCCGC
GGCTGGCCGT TCCACCTCCA CACGCTGCAC GAGTACCTGG CGCACTTCCC GGGGCGCACC
GCGTTCCCCG TCTTCGGCAT GGCGCCGACC GGCGACGGCC CGTCGCAGGA CGTGCAGGCG
CTTCTGGCCG GCGCGCTGTC GCTGACCGCG CCGGTCACCA CCGGCTCGCG GGTCGACGGC
GGACCGAGCG CCGCGCCCGT GGTGGGCGGC GAAGTGGTCT GGGCCGACAG CGAACGCTTC
GGCGTCCGCA GCGCGGATGC GCTCTACACG TTCCACCACG GCTCGGGCGT GGCGCTGATG
TTCCACCACC TGTTCGCGCC GGCGGAATCC GAGGCCGCGT CCGAGGAAGC CTGGCAGCAC
TGGCTGACCG CGACCGTCCA GAACACCGAC CAGAACACCA ATGAAGGAGT CTGA
 
Protein sequence
MTHPFEIELE TTLPATPEQV WDAIATGPGV DSWFMGRNEI EAREGGTAAM DTGGYREEAV 
VTAYDPGKRL ATRTSPDADG RFMAFEYLLE GREGGSTVLR VVHSGMLGDD WENEYDALRR
GWPFHLHTLH EYLAHFPGRT AFPVFGMAPT GDGPSQDVQA LLAGALSLTA PVTTGSRVDG
GPSAAPVVGG EVVWADSERF GVRSADALYT FHHGSGVALM FHHLFAPAES EAASEEAWQH
WLTATVQNTD QNTNEGV