Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1107 |
Symbol | |
ID | 8332442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1251316 |
End bp | 1252368 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644954255 |
Product | oxidoreductase domain protein |
Protein accession | YP_003111874 |
Protein GI | 256390310 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCTT CCGAGAACCC GCTGCGCGTC GGCCTGATCG GCTACGGCCT CGCCGGGCGC GCCTTCCACG CGCCGCTGAT CGCCACGACG CCGGGCATGC GGCTGCAGAA CGTGGTGACC GCCGACGCCG AACGGCGCGA ACAGCTGAGC CGCGAGTACC CGGAGGCGCG CGCCGTCGAC AGCGTCGAGC AGCTGCTCGC CGATCCCTCG GCGCTCGACG TCGTGGTCGT CGCCTCCCCC AACGACACGC ACAGCCCGTC CGCGCGCGCC GCGCTGGAGG CGGGACTGCC GGTCGTGGTC GACAAGCCGC TCGCCCCGAC CGCCGCCGAG GCCCGCGCAC TGATCGAGCT CGCCGAGGCG CGCGGTGTGA TGCTGACCGT CTTCCAGAAC CGGCGCTGGG ACAGCGACTT CCGCACCGCG AAGCACCTGA TCGCGGACGG CGCGCTGGGC GACGTGCACC GCTATGAATC CCGTTTCGAG CGCTGGCGTC CGCAGGTCGC CACCGGCTGG CGCGAGTCGG CGGACCCGGC CAAGGCCGGC GGCGTCCTCA ACGACCTCGG CAGCCATCTG GTCGACCAGG CGCTGCACCT GTTCGGTCCG GCCGACCGCG TCTACGCCGA GGTCAACGTC CGGCGCCCCG GCGCGGCTGT CGACGACGAC GCTTTCGTCG CGCTGACCCA CGCCTCCGGC GTCCACTCGC ATCTGTGGAT GAGCGCCGTG GCCGCGCAAC CCGGACCGCG CCTGCGGATT CTCGGCAATC AGAGTGCGTA CTCGGTCCAG GGCCTGGACC CGCAGGAGGC GGCACTGCGC GCCGGCGAGC GTCCCGGACC CGGCTGGGGC GAGCCGGCCG ACAGCGATTG GGGACTGCTC GGCGCGACCG AGGACGCGCG GCGGTATCCG TCGCTGCCGG GTGACTATCC CGCCTTCTAC GCCGGCGTCG TCGCGGCGCT GCGCGACGGC GCGCCGGCTC CCGTCGATCC CCGCGACGCG CTGGCCACGC TCGAGGTCCT GGAACGCGCC CGACGCTCGG CTGCGGAGGG CAGGACCCTG TAA
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Protein sequence | MSASENPLRV GLIGYGLAGR AFHAPLIATT PGMRLQNVVT ADAERREQLS REYPEARAVD SVEQLLADPS ALDVVVVASP NDTHSPSARA ALEAGLPVVV DKPLAPTAAE ARALIELAEA RGVMLTVFQN RRWDSDFRTA KHLIADGALG DVHRYESRFE RWRPQVATGW RESADPAKAG GVLNDLGSHL VDQALHLFGP ADRVYAEVNV RRPGAAVDDD AFVALTHASG VHSHLWMSAV AAQPGPRLRI LGNQSAYSVQ GLDPQEAALR AGERPGPGWG EPADSDWGLL GATEDARRYP SLPGDYPAFY AGVVAALRDG APAPVDPRDA LATLEVLERA RRSAAEGRTL
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