| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1100 |
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| Symbol | |
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| ID | 8332435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1243621 |
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| End bp | 1244457 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644954248 |
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| Product | major intrinsic protein |
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| Protein accession | YP_003111867 |
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| Protein GI | 256390303 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.591706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAA ACGCAGAGAA CACAGCGAAC ACAGCGAACA CAGCGAACGC GGAAACCGCG
GGAAACACGT TCCCCCAAAA GCTCCTCGCG GAGCTGATCG GCACGGCGGT CCTGGTCTTC
ATCGGTGTCG GCTCCGTTCC CGCCACCCTC ATCCTCGGCG GCACCGCCCC GTTCACCATG
GCCGAACTCG GCATGATCTC CTTCGCGTTC GCCATGGCCG TGGTCGCGAT GGTCTACACC
CTCGGGCACG TCTCCGGCTG CCAGATCAAC CCCGCCGTCA CCCTCGCGCT GGCCGCCACC
GGCAAGCTGA CCTGGCGCGA CGTGCCCGGC TATATCGCCG CACAGGTCGC GGGGGCGACA
CTCGGTGCAT GGGCGATCGT CGGCGTGCTC GGTCACAAGG CGGTCGACGC GGGCCTGGGC
ATCGCCTCCT ACGGCTCCGG CGTCGGCACC GGCCGGGCGT TCCTCGCCGA GGCGATCGGC
ACCGGGATCC TGGTGTTCGT CGTGTTCGGC GCGGCGGTGG ACAGCCGCGC GCAGAGCTCG
TTCGCGGGTT TGGCGATCGG CCTGGCGGTG TTCGCGATCA TCATCCCGAT CGCCCCGGCG
ACCGGCGCGT CCATCAACCC GGCCCGCACC ATCGGACCGA TGCTCATGGG CCAGTTCTAT
GGCACGACCG TGCACTGGAA CCAGCTTTGG GTCTACCTGA GCGCGGAGAT ACTCGCCGGT
GTGGCAGCGG GCTTCGTCTA CGTCGCGCTC AACGCCCGGC GCGCGGCCGC CCCGATTGCC
CCGACCGCCC CCTCCGCTTC GTCCGTCGCA GTGCCCTCCG AAGGAGTCCC GGCATGA
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| Protein sequence | MAENAENTAN TANTANAETA GNTFPQKLLA ELIGTAVLVF IGVGSVPATL ILGGTAPFTM
AELGMISFAF AMAVVAMVYT LGHVSGCQIN PAVTLALAAT GKLTWRDVPG YIAAQVAGAT
LGAWAIVGVL GHKAVDAGLG IASYGSGVGT GRAFLAEAIG TGILVFVVFG AAVDSRAQSS
FAGLAIGLAV FAIIIPIAPA TGASINPART IGPMLMGQFY GTTVHWNQLW VYLSAEILAG
VAAGFVYVAL NARRAAAPIA PTAPSASSVA VPSEGVPA
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