| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1091 |
|---|
| Symbol | |
|---|
| ID | 8332426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1233466 |
|---|
| End bp | 1235175 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 569 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644954239 |
|---|
| Product | acetyl-CoA carboxylase, carboxyl transferase, beta subunit |
|---|
| Protein accession | YP_003111858 |
|---|
| Protein GI | 256390294 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0825] Acetyl-CoA carboxylase alpha subunit |
|---|
| TIGRFAM ID | [TIGR00513] acetyl-CoA carboxylase, carboxyl transferase, alpha subunit
[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCA TCGACGGTCC GCCGGACGTT GTCGCGCCGA ATTGGGTGCG GTGTGAGGGC
TGCGCCGGAC TGCTCTACGC GAAGCGCTTC GCCAGGATGC TGAAAGTCTG CCCGGAGTGT
TCGCGGCACG GTCGGCTGAC CGCGCCGGAG CGGCTCGAGC AGCTGCTGGA CCCCGGTTCG
GCCGAGCCCA TCTTCGGCGG CCGCACCGTG CATGACCCGC TGGAGTTCGT CGACAGCCGA
CCCTATCCGG AGCGGCTGCG GGACGCCAGG GCGGACACCG GGCTGTCCGA CGCCGTGGTC
TGTGCCAGCG GCCTGATCGA GGGGCAGCCG GTCGTCGTCG CGGCGATGGA CTTCCGGTTC
CTCGGCGGCA GTCTCGGCTG CGCGGTCGGC GCGATGATCA CGCAGGTCGC GGCGACCAGC
ATCGCTCGCC GCGTCCCGCT GCTGGTGGTG GCCGCCTCCG GCGGCGCCAG GATGCAGGAG
GGCGCGCTGT CGCTGATGCA GATGGCGAAG ACCGCGCAGG CGTTCGCGGA GTTGGACGAG
GCCGGGATCC TGACGATCTC GTTGATCACC GACCCGACGT ACGGCGGCGT CGCGGCCTCG
TTCGCGACGC TGGCCGACGT GATCTTCGCC GAGCCCGGCG CGCGGATGGG CTTCGCCGGA
CCGCGGGTGA TCGAGCAGAC GACCGGCGAA CGCCTTCCGG AGGGATTTCA GACTGCTGAG
TTCCTGCTGC GCCACGGGAT GGTCGACGAC GTCATCCCGC GTGCCGGTCT GCGGTCGGCG
CTGGGCCGGC TGCTGAGTCT TCGCGGATCG GACCAGAGCC CGCCCTCGGC TGCCGGCGCG
GTCGGATCGG TCGTGCGGGC GCCGGAGGAA CTGACCGAAC TCGCGCCCTG GGAGACGGTC
CGCCTGGCGC GGCATCCCGA GCGTCCGAGT ACGCCGGACT ACATCCGGCA CGTCGTCGAC
GAATTCCAGG AACTGCACGG CGACCGCCTC GCCGAGGACT GCCCGGCCAT CGTCGGCGGC
ACCGGCTTGA TCGCCGGCAT CCCGGTGATG CTGATCGGCC ACCACAAGGG CGGTCGCGAT
CTCACCGAGC GGCGGCGCCG GCGGTTCGGC ATGGCGACGC CCGCCGGGTA CCGCAAGGCG
GCGCGGCTGA TGCGGATGGC CGCCAAGCTC GGTATGCCGG TCGTCACCCT CATCGACACG
CCGGGTGCGA ATCCGGGTCC TGATGCCGAA CGCGCCGGAC AGGCGGTCGC CATCGCCGAG
AACCTGCGGC TGATGGCCCG GTTGCCGGTA CCGATCGTCG CCGTGCTGAT CGGCGAGGGC
GGCAGCGGCG GGGCGCTGGC CCTGGCCGTC GCCGACCGGG TTCTGGTCAG CGCCAACGGG
ATCTACTCGG TGATCAGCCC GGAGGGCTGC GCCGCGATCC TGTGGAAGGC GCCGGAAGCC
GCGACGACGG CAGCCGCCGC GTTGCGCGTG CGAGCCGGCG ATCTGCTGCG GCTCGGCATC
GTCGACGGGG TCGTCCCCGA GCCGCCGGAC GGCGCGCACC GGGACTGTGC CGGGGCGGCG
ACCTTGTTGG AGAGCGCTCT GAAGACGACT CTTCGAGAGC TGATTCCCTG GGACCCGCAG
CGGCTGATCG CCGAGCGCAG AGACCGTTTC CACCGCTTCG GGACCGAAGG GGTCGAGCAG
GTGGAACCCG AGGAGAGGAG CAGGCCGTGA
|
|---|
| Protein sequence | MTAIDGPPDV VAPNWVRCEG CAGLLYAKRF ARMLKVCPEC SRHGRLTAPE RLEQLLDPGS
AEPIFGGRTV HDPLEFVDSR PYPERLRDAR ADTGLSDAVV CASGLIEGQP VVVAAMDFRF
LGGSLGCAVG AMITQVAATS IARRVPLLVV AASGGARMQE GALSLMQMAK TAQAFAELDE
AGILTISLIT DPTYGGVAAS FATLADVIFA EPGARMGFAG PRVIEQTTGE RLPEGFQTAE
FLLRHGMVDD VIPRAGLRSA LGRLLSLRGS DQSPPSAAGA VGSVVRAPEE LTELAPWETV
RLARHPERPS TPDYIRHVVD EFQELHGDRL AEDCPAIVGG TGLIAGIPVM LIGHHKGGRD
LTERRRRRFG MATPAGYRKA ARLMRMAAKL GMPVVTLIDT PGANPGPDAE RAGQAVAIAE
NLRLMARLPV PIVAVLIGEG GSGGALALAV ADRVLVSANG IYSVISPEGC AAILWKAPEA
ATTAAAALRV RAGDLLRLGI VDGVVPEPPD GAHRDCAGAA TLLESALKTT LRELIPWDPQ
RLIAERRDRF HRFGTEGVEQ VEPEERSRP
|
|---|
| |