| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1080 |
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| Symbol | |
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| ID | 8332415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1222953 |
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| End bp | 1223792 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644954228 |
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| Product | tryptophan 23-dioxygenase |
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| Protein accession | YP_003111847 |
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| Protein GI | 256390283 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3483] Tryptophan 2,3-dioxygenase (vermilion) |
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| TIGRFAM ID | [TIGR03036] tryptophan 2,3-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.171749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCG TTTCGCAGCA GTCTGACGTG CTCGCGCCCC GATACGACCT CGGGGGCACG
ACCCCCTATG ACGATTACAT CCGGGCCTCC GCGCTGGCGG GCCTGCAACA GACCCGCACC
GATGATCCCG GTGAGATGGC GTTCCTCGTG ACCAGCCAGG TCATGGAGTT GTGGTTCAAG
CTCCTGGTGC ACGAGTGGCA GACCGCCGGC GCGGCTCTGC GTGACGACGA CCTGCCCACC
GCGATGACCG CCCTCGGCCG CAGCCTGGAC GAACTGCAGG CGTTGAACGC CTCCTGGCTG
CCGCTCGCGC GCCTCACCCC GACGCAGTTC AACGCCTATC GCCCCGCGTT GGGCGACGGC
TCGGGCTTCC AGTCCGCGAT GTACCGGCGG CTGGAGTTCG TGCTCGGCGA GCGGTCGGCG
TCGATGCTCG TGCCGCACGC CGGCACGCCG GGCATGCAGG CGGAGCTGAA GCAGGCGCTG
GGCGAACCGA GCCTGTACGA CGAGGTGCTG CGGCTGCTGC ACCGTCGCGG CTACCCGATT
CCGCAAGCAG TTCTCGACCG GGACCTCGCT CAGCGCTACG CGGGCGACCC GGCGGTGGAG
CAGATCTGGG CCGAGATCTA CGCCGCGCCG GAGCGTGAGC CGGAGCTGGT CCGCCTCGGC
GAGACGCTCA CCGACGTCGC CGAGGCGATA TGGCGATGGC GCGGCGACCA TCTGATGGCG
ACGCGCCGCG CGATGGGCGC CAAGGTCGGG ACCGGCGGCT CGTCGGGGGT GGCGTGGCTG
GCCAAGCGCG CGGACGCGCT GATCTTCCCG GAGCTGTGGA CGGCGCGGAG CCGGGTCTGA
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| Protein sequence | MSSVSQQSDV LAPRYDLGGT TPYDDYIRAS ALAGLQQTRT DDPGEMAFLV TSQVMELWFK
LLVHEWQTAG AALRDDDLPT AMTALGRSLD ELQALNASWL PLARLTPTQF NAYRPALGDG
SGFQSAMYRR LEFVLGERSA SMLVPHAGTP GMQAELKQAL GEPSLYDEVL RLLHRRGYPI
PQAVLDRDLA QRYAGDPAVE QIWAEIYAAP EREPELVRLG ETLTDVAEAI WRWRGDHLMA
TRRAMGAKVG TGGSSGVAWL AKRADALIFP ELWTARSRV
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