Gene Caci_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1078 
Symbol 
ID8332413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1221380 
End bp1222081 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content69% 
IMG OID644954226 
Producthypothetical protein 
Protein accessionYP_003111845 
Protein GI256390281 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.158233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.946862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTG ACAACCTCAC GGTCGTCCTG GCTCACGGCG CTTGGGCAGA CGGCTCCAGT 
TGGGAAAAGG TAGTCAGCGC CTTGGAATCC GCGGGCGTCT GTACCATCGC CGCTCAGCTT
CCGCTGACCT CGCTCGACGA CGACGTGGCG GCGCTGGATC GCACCATCGA GCACGTCGAG
GGACCGGTCG TGCTGGCCGG ACACGCCTAC GCCGGCGCCG TCATCGCCGC CTCCCGAGCC
GCGAACGTCC GCGCGCTGGT CTACGTCGCG GCGCTCGCCC CGGACGAGGG CGAGACCGTC
GCCGACATCC TCGGCCGCGT CGCGCCCCAC CCGGCGGCGC CGGCGCTGGC GCCCGACGCG
CACGGGCTGA TCTGGCTCCC CGACGAAGCG TTCCCCGCGG CCTTCGCGCA GGACGCCACG
AGCGAGGAAC AGACGTATCT GCGGGCTGTG CAGCAGCCGA TTTCCGTTGC GTGCATCACG
GTTCCGGTCG GTCGTCCGCT GTGGAAGGAC GTGCCTGCCT GGTTCCTCAT CGCCCAGAAC
GACCGCATGA TCCCGGTCGA GAACCAGCGC TTCATGGCTG AGCGGATGGG TGCCACGGTC
AGCGTGCACG CGGTGGACCA CGTTCCGCTG CTCACCGCAC CGACGGTCGT CGCCGACGTG
CTGCTCGACG TCGTGGAGAA GGTCGGTGGG AATCATGGCT GA
 
Protein sequence
MSTDNLTVVL AHGAWADGSS WEKVVSALES AGVCTIAAQL PLTSLDDDVA ALDRTIEHVE 
GPVVLAGHAY AGAVIAASRA ANVRALVYVA ALAPDEGETV ADILGRVAPH PAAPALAPDA
HGLIWLPDEA FPAAFAQDAT SEEQTYLRAV QQPISVACIT VPVGRPLWKD VPAWFLIAQN
DRMIPVENQR FMAERMGATV SVHAVDHVPL LTAPTVVADV LLDVVEKVGG NHG