Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1078 |
Symbol | |
ID | 8332413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1221380 |
End bp | 1222081 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644954226 |
Product | hypothetical protein |
Protein accession | YP_003111845 |
Protein GI | 256390281 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.158233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.946862 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACTG ACAACCTCAC GGTCGTCCTG GCTCACGGCG CTTGGGCAGA CGGCTCCAGT TGGGAAAAGG TAGTCAGCGC CTTGGAATCC GCGGGCGTCT GTACCATCGC CGCTCAGCTT CCGCTGACCT CGCTCGACGA CGACGTGGCG GCGCTGGATC GCACCATCGA GCACGTCGAG GGACCGGTCG TGCTGGCCGG ACACGCCTAC GCCGGCGCCG TCATCGCCGC CTCCCGAGCC GCGAACGTCC GCGCGCTGGT CTACGTCGCG GCGCTCGCCC CGGACGAGGG CGAGACCGTC GCCGACATCC TCGGCCGCGT CGCGCCCCAC CCGGCGGCGC CGGCGCTGGC GCCCGACGCG CACGGGCTGA TCTGGCTCCC CGACGAAGCG TTCCCCGCGG CCTTCGCGCA GGACGCCACG AGCGAGGAAC AGACGTATCT GCGGGCTGTG CAGCAGCCGA TTTCCGTTGC GTGCATCACG GTTCCGGTCG GTCGTCCGCT GTGGAAGGAC GTGCCTGCCT GGTTCCTCAT CGCCCAGAAC GACCGCATGA TCCCGGTCGA GAACCAGCGC TTCATGGCTG AGCGGATGGG TGCCACGGTC AGCGTGCACG CGGTGGACCA CGTTCCGCTG CTCACCGCAC CGACGGTCGT CGCCGACGTG CTGCTCGACG TCGTGGAGAA GGTCGGTGGG AATCATGGCT GA
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Protein sequence | MSTDNLTVVL AHGAWADGSS WEKVVSALES AGVCTIAAQL PLTSLDDDVA ALDRTIEHVE GPVVLAGHAY AGAVIAASRA ANVRALVYVA ALAPDEGETV ADILGRVAPH PAAPALAPDA HGLIWLPDEA FPAAFAQDAT SEEQTYLRAV QQPISVACIT VPVGRPLWKD VPAWFLIAQN DRMIPVENQR FMAERMGATV SVHAVDHVPL LTAPTVVADV LLDVVEKVGG NHG
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