Gene Caci_1066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1066 
Symbol 
ID8332401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1209978 
End bp1210463 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content69% 
IMG OID644954214 
Producthypothetical protein 
Protein accessionYP_003111833 
Protein GI256390269 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.316842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.867737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCGA AATACGGGGC AACGGGGCGC GGCAGCCGGC AGGCCGCGAC GGTTCTGGGC 
ACCATCTGCC TGGGTCTGGC CACCGCACTG CCGGCCAGCG CGGCCACGAA CACCGCTCAG
TCCACCGCGC ACCTGCTCGG ACTGAGCGTG CAGTCACACG CGACCTACGA CCGGGTCATC
CTCACCGTGA GCAGCATCCC GGGCTACACC GTGACGCCCA CGGACGAGCT GATGGGCGGC
GGCTCGGGCA AGGACGTCAC GCTGCCGAAC TCGAACACCT ACCTCGACGT CGAGCTTCAG
CCCTCGGACA TCGTCGGCTT CAGCGGCCCG AGCGAGATCA CCACCGGCGA CCCGGAAGTC
GCCGCGGTGG CGGAGCTGAG CTCCTACGAG GGCTACACCC AGGTCGGCAT CGGCCTGAGC
CACGCCTCCA GCTACACCGT CACGGTGCTC AGCTCGACCC AGCTGGCGAT CGACGTCGCC
CACTGA
 
Protein sequence
MLSKYGATGR GSRQAATVLG TICLGLATAL PASAATNTAQ STAHLLGLSV QSHATYDRVI 
LTVSSIPGYT VTPTDELMGG GSGKDVTLPN SNTYLDVELQ PSDIVGFSGP SEITTGDPEV
AAVAELSSYE GYTQVGIGLS HASSYTVTVL SSTQLAIDVA H