| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1052 |
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| Symbol | |
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| ID | 8332387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1193497 |
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| End bp | 1197585 |
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| Gene Length | 4089 bp |
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| Protein Length | 1362 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644954200 |
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| Product | coagulation factor 5/8 type domain protein |
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| Protein accession | YP_003111819 |
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| Protein GI | 256390255 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.311777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGG AATCGAATCA GCCGTTCCGC GCGTCGCGGC GGACCGTCGT CGCGGCGGCG
TCGACTTTGT TGGCCGGCTT CGCGGTGGAC ACCGCTTTCC CGAGTGTCGG CTTCGCCGCC
GAGCCGGGGA AGGCTGGAGT CCCGGGTCAT GCGCCGGCGC CGGGGGAGCT GGCGATGTAC
CGGCCGATCG AGGTCTCCTC GACCGATTAC GCGCCCACGC CTGGCGCGTT CGCCGTCGAC
CGGGTGACCT CGGCCGGGGT CAGGGGTACC GGGTGGCGCG CCGCGGCCGG TGATCCGCAG
TGGATCTCCG TGGACTTGCA GGCTGTCTGC CAGGTCACCT CTGTCCATCT GACCTTCGAG
GCGGCCGCGG GCGATCCGGT CTTCGTCAAG CCGACCTCCG GCAACTGGGC CGATGGGACG
ACGGGCAAGG AGCTGCTCTC CAGCTACGCG TCCGCCTTCG TCGTCGAGGT GTCGACGGAC
AAGAAGTCGT GGACGAGCGT GTATCAGACG GCGTCGGGCA CCGGCGGCGC GGTCGTGATC
GACCTGGCGG CTCCGGTCTC GGCGCGCTGG GTGCGGCTGA CGGCGTCCAA GCGCTCGGAT
GCGAATCCCT TGGGACTCAA CGGTTTCCAG GTGTACGGCA GCGCGAGCGG GCACCGGCCC
GCCGCCACCG GGTGGACCGA CTGGGGTACG CACGACAACC ACGCGCCCGG ACTGGTCGTG
GCCGCCGACG GCACCGTGCC GCTGGAGTCC GGCTGGGTGC TGACGATGGA CGACTGGGCT
CCCGGCGACG GGACCGCGCT GTCCGTGCCG ACCGTGGACA CCAGCGGGTG GTTGCCCGCC
ACGGTTCCCG GGACCGTCCT GGCCTCGCTC GTCGAGCAGG GGCATCTGCC CGATCCGGTC
GCGGGCTTCA ACAACCTGCG GATTCCCGAG GCGCTGTCCC GCCATTCCTG GTGGTACAAG
CGCGACTTCG CGCTGCCCGC CGCGCTGGGC GCCGGGCACG GACGCCGGAT CTGGCTGGAG
TTCGACGGAG TCAACCACCA GGCCGCGCTG TTCCTCAACG GAGCGCAGAT CGGCAGCCTC
ACCTACCCGT TCGCGCGCGC CGCGATCGAG GTGACCGAGC ACTTGGTCGC CGGCGAGCAG
TCCCTGGCCG TGAAGATCGA CCCGATGCCG ATTCCCGGCA GCCCGGGCGA CAAGGGACCG
GCCGGTCAGT CCTGGGTCGA TGCCGGCGCG CAGATCATGA ACATGAACTC CCCGACATAC
CTGGCCGCCT CGGGCTGGGA CTGGATGCCC GCGGTCCGCG ACCGGGTCAG CGGTATCTGG
AACCACGTGC GGCTGCGCTC CACCGGGGAC GTCGTGATCG GCGACCCTCG GGTGGACACG
GTGCTGCCGG CGCTGCCCGA CACCACCAGC GCGTCGGTGA CCATCGTCGT TCCCGTGCGC
AACGCCGGGT CCGCCGATGT CAGCGCGACC GTGACAGCGT CCTTCGACAC CGTGCGCCTC
TCGCAGACGG TGACCGTCCC GGCCGGTAAG AACCTGGACG TCACCTTCGC CCCGGCGAAG
TTCGCGCAGC TGAACCTGCG CGATCCGAAG CTGTGGTGGC CCAACGGCTA CGGCGATGCG
AACCTGCACA CCTTGAACCT GGCGGTCACG GTCGCGGGTC AGCGCAGCGA CCAGCGCACC
ACCCGCTTCG GCATCCGGCA GTTCGACTAC GAGTACAAGA CGCCGCTGCC CTTCGTCGCA
TCAGCCGACG CGTACACCCA GACCACGGAC CTCGGTGCGC GGCAGGCGCG CTATGTGCGC
ATCAACTGCC AGACGCGCGC GACCGGATGG GGCTTCTCGC TCTGGACGCT GTCCGTCCTG
AACAGCGCCA CGCCCGGTAC CGACCTGGCA CTGCACCAGC CGACGACCGC ATCGACGCAG
GACCCCTCGA ACCCGGTGAC CAACGCCACC GACGGGGACG CGAACACCCG CTGGTCCTCC
GACTTCGCCG ACGACCAGTG GATCGAGGTG GACCTCGGGG CGTCAGTGTC CTTCGATCAG
GTCGCCATCA CCTGGGAGCA GGCGTACGCG CGCACGTACA CCGTGCAGGT CTCGACGGAC
GGCTCGGTGT GGACGGACGC GAAGAGCGTG GACAACACGG CGATCCCGCT TCCGTTCAAC
GGCGGCGACG CGAGCCTGGA CGTCGAGTCG TTCGCCGCGG CCTCCGGCCG CTACGTGCGG
ATCAGCGGCG GCGTGCGCGA GACCAGCTGG GGTAACTCGC TGTGGTCGCT GTCGGTCCTG
AACAGCGCCA CGCCCGGAGT CGACCTGGCC TTGCACAAGA CGGCCACCGC CTCGACCGAA
GACCCCTCGA ACCCGGCGGC CAACGCCACC GACGGCAACA GCGGCACCCG ATGGTCCTCG
GACTATGCGG ACAACCAATG GATCCAGGTG GATCTCGGCT CGTCGCAGAC CTTTGACGGA
GTCGGCATCC TGTGGGAGCA GGCGTATCCG AAGACCTACG TGATCCAGGT GTCCGACGAC
GGCTCGTCGT GGACCGACGT GAAGACAGTC GGCCTCGCGC CGGAGTCGCT GAAGATCAGC
GTGAACGGTG TCAGAGTCCT GTGCCGGGGC GGCAACTGGG GCTGGGACGA ACTGCTGCGC
CGGATGCCCT CCGACCGGAT GGACGCGGCG ATCCGCATGC ATCGGGACAT GAACTTCACG
ATGGTCCGCA ACTGGGTCGG CGCCAGCAAC CGTGAGGAGT TCTACGCCGC GTGCGACGAG
TTCGGGCTGC TGGTGTGGAA CGACTTCCCG AACGCCTGGG GCATGGACCC GCCGGACCAC
GACGCGTACA ACTCGATCGC CGCGGACACC GTCCTGCGCT ACCGGATCCA CCCGAGCGTC
GTCGTGTGGT GCGGCGCGAA CGAGGGGAAT CCGCCGCAGG CGATCGACGA GGGCATGCGC
AACGCGGTGA CGAACGGCGC GCCCGGCATC CTGTACCAGA GCAACTCCGC CGGCGGGAAC
ATCACCGGCG GCGGTCCCTA CTACTGGGTC GAGCCGGAGA CCTACTACGA CCCGGCGACG
TACGGCAGCC ACAGCTTCGG TTTCCACACC GAGATCGGGA TGCCGGTGGT CTCCACGGCC
GACAGCCTGC GGAACATGGC CGGCGAACAG CCGGCGTGGC CCATCGGCGG TCCGTGGTAC
TACCACGACT GGAGCCAGTA CGGTAACCAG TCGCCGCTGC AGTACCAGGC CGCGATCGAA
GCCCGGCTCC AGACCTCGAA CACCCTCGAG GACTTCGCCC GCAAGGCGCA GTTCGTCAAC
TATGAGAACG CGCGCGCGAT GTTCGAGGCG TGGAACGCGA ACCTGTGGGC CGATGCCAGC
GGTCTGATGC TCTGGATGTC GCACCCGGCG TGGCACAGCA CGGTGTGGCA GACCTACGAC
TATGACTTCG ACGTCAACGG CATGTACTAC GGCGCGCGCA AGGCGTGCGA GCCCGTGCAC
GTGCAAGCCG ATCCGGTCCA CTGGCAGGTC GTCGCGGTGA ACCACACGCC GCACGCGGTG
AGCGGCGCGA CGGTCTCGGC GCGGCTGTTC GACCTGTCGG GCAGGCAGCT CGGCACGACG
CAGAGCGCTG CGATCAACGT CGCGGTGGCG GACAGTGCGA AGGCCTTCGC GGTGGCATGG
ACCGACGCGC TTCCCGATCT GCACCTGTTG CGCCTTACGC TCCAGGACGC CTCGGGCAAG
ACACTGTCGG AGAACACGTA CTGGCGGTAC CGCGCTCCGT CGGCGATGCA GGCGCTGAAC
AAGGCGCAGC AGACCCGGAT CACGGCCTCG ATCACCGGGG CGACCAGCGG CGGTGACGGG
CGCCGCCAGC TGACGGCGAC GGTTCGCAAC CAGGGCTCGA GCGTCGCGGC GATGGTGCGG
CTATCACTGC AGAACCGCGC TTCGGGGCAG CGGGTCTTGC CCACGCTCTA CGGAGAGAAC
TACGTGTGGC TGCTCCCCGG CGAGACGCGC ACGATCATCG TGTCGTTCCC GTCCAGCGCG
CTGCCCAAGG AGCAGCCGGA GCTGCACGTC GAGGGCTACA ACACGAGCGC GGTCATCGCT
CGCGCATAG
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| Protein sequence | MAQESNQPFR ASRRTVVAAA STLLAGFAVD TAFPSVGFAA EPGKAGVPGH APAPGELAMY
RPIEVSSTDY APTPGAFAVD RVTSAGVRGT GWRAAAGDPQ WISVDLQAVC QVTSVHLTFE
AAAGDPVFVK PTSGNWADGT TGKELLSSYA SAFVVEVSTD KKSWTSVYQT ASGTGGAVVI
DLAAPVSARW VRLTASKRSD ANPLGLNGFQ VYGSASGHRP AATGWTDWGT HDNHAPGLVV
AADGTVPLES GWVLTMDDWA PGDGTALSVP TVDTSGWLPA TVPGTVLASL VEQGHLPDPV
AGFNNLRIPE ALSRHSWWYK RDFALPAALG AGHGRRIWLE FDGVNHQAAL FLNGAQIGSL
TYPFARAAIE VTEHLVAGEQ SLAVKIDPMP IPGSPGDKGP AGQSWVDAGA QIMNMNSPTY
LAASGWDWMP AVRDRVSGIW NHVRLRSTGD VVIGDPRVDT VLPALPDTTS ASVTIVVPVR
NAGSADVSAT VTASFDTVRL SQTVTVPAGK NLDVTFAPAK FAQLNLRDPK LWWPNGYGDA
NLHTLNLAVT VAGQRSDQRT TRFGIRQFDY EYKTPLPFVA SADAYTQTTD LGARQARYVR
INCQTRATGW GFSLWTLSVL NSATPGTDLA LHQPTTASTQ DPSNPVTNAT DGDANTRWSS
DFADDQWIEV DLGASVSFDQ VAITWEQAYA RTYTVQVSTD GSVWTDAKSV DNTAIPLPFN
GGDASLDVES FAAASGRYVR ISGGVRETSW GNSLWSLSVL NSATPGVDLA LHKTATASTE
DPSNPAANAT DGNSGTRWSS DYADNQWIQV DLGSSQTFDG VGILWEQAYP KTYVIQVSDD
GSSWTDVKTV GLAPESLKIS VNGVRVLCRG GNWGWDELLR RMPSDRMDAA IRMHRDMNFT
MVRNWVGASN REEFYAACDE FGLLVWNDFP NAWGMDPPDH DAYNSIAADT VLRYRIHPSV
VVWCGANEGN PPQAIDEGMR NAVTNGAPGI LYQSNSAGGN ITGGGPYYWV EPETYYDPAT
YGSHSFGFHT EIGMPVVSTA DSLRNMAGEQ PAWPIGGPWY YHDWSQYGNQ SPLQYQAAIE
ARLQTSNTLE DFARKAQFVN YENARAMFEA WNANLWADAS GLMLWMSHPA WHSTVWQTYD
YDFDVNGMYY GARKACEPVH VQADPVHWQV VAVNHTPHAV SGATVSARLF DLSGRQLGTT
QSAAINVAVA DSAKAFAVAW TDALPDLHLL RLTLQDASGK TLSENTYWRY RAPSAMQALN
KAQQTRITAS ITGATSGGDG RRQLTATVRN QGSSVAAMVR LSLQNRASGQ RVLPTLYGEN
YVWLLPGETR TIIVSFPSSA LPKEQPELHV EGYNTSAVIA RA
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