Gene Caci_1049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1049 
Symbol 
ID8332384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1188529 
End bp1189665 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content72% 
IMG OID644954197 
Producthypothetical protein 
Protein accessionYP_003111816 
Protein GI256390252 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.103501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.689051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCAG CGAAACGAGC GGCGGTGGCG CTGCTGTCCG CCGCGGCCTT CACCGCGACG 
GCCGTCGGCA CCGCGCAGGC GGCCGGCCGC TGGCAGCAGG TCCCGGTCCC GACCGGGTCC
GGCAACGTCC TGGCGATGAC CCAGATCGAC CAGCACACCA CCTGGGGCGC CGGCTTCCGG
CTGATCACCG ACGGCGACAG CACGACGCTC ACCCCGCTGC TGCTGGCCCG CGACGACCGC
GCCGGGAGTG CGTGGAAGCG GGTCGCCACT CCCGCCGACG GCGCGAACAG CCGGATCAAC
GCGCTGTCCG CCGACGGTGC CCGCAACGTG TGGCTGGTCG GCGACAACGA CTCGGCGACC
GACGGTTCGA TCCTCACCGA GCACTGGGAC GGCAAGGCTT GGCAGACCGC CAGCGCCTCG
GTCCCTGACG GGACGCTCTC CGCCGGATTC CTCGGCGTCG CCACCGTCGG CCCGCGTGAC
GCCTGGGCCG TCGGCTGGAC GCAGCGCATG CGCGGCGACG ACTCCTACGA GACCGGCCTC
ATCGAGCACT GGAACGGCAA GGCCTGGCAG CAGATCAAGC TCCCGGCGGC CGTTCCCGAC
ACGGAACTGT TCAGCATCTC GGCCACCGGA CCCCGCGACA TCTGGGCCGG CGGCGTCCTC
ACCGACGGCA CCGACCAGCC GGTGCTGCTG CACTACGACG GCCACACCTG GACGCGCGCG
ACCGTCCCGA ACACCGGTCT GTACGGCGAG TTCAACACCG TCGTGGCCGC CGCGCCGAAC
AACGTCTGGG CCGCCGGGCG CACCCTCGTC GATGACAAGG ACCGCGGCCA CCCGCTGGTC
GCGCACTACG ACGGCCACAG CTGGAAGACC GTCGCGGCTC CGGGCACCGG CGTGGTCAAC
GCCGCCGCCG TGACCCCCGG CGGCGTCACG GTCGTCGGCT ACGACAAGAC CACCAGCCAG
TCCTACGGCG AGCAGCTGGA CGGTACCGGC TGGCACTCGC TGAACCTGCC GACGGTCGGC
GTCGACTCGA CGCCCTACTC CCTGTCCGTG AACTCCAGCA CCGTCACCGT CGGCGGCGTC
TACACGCCGG ACGAGACGAG CCCGTTCCAG CCGCTGATCC TCACTGCGAG CCGCTGA
 
Protein sequence
MNSAKRAAVA LLSAAAFTAT AVGTAQAAGR WQQVPVPTGS GNVLAMTQID QHTTWGAGFR 
LITDGDSTTL TPLLLARDDR AGSAWKRVAT PADGANSRIN ALSADGARNV WLVGDNDSAT
DGSILTEHWD GKAWQTASAS VPDGTLSAGF LGVATVGPRD AWAVGWTQRM RGDDSYETGL
IEHWNGKAWQ QIKLPAAVPD TELFSISATG PRDIWAGGVL TDGTDQPVLL HYDGHTWTRA
TVPNTGLYGE FNTVVAAAPN NVWAAGRTLV DDKDRGHPLV AHYDGHSWKT VAAPGTGVVN
AAAVTPGGVT VVGYDKTTSQ SYGEQLDGTG WHSLNLPTVG VDSTPYSLSV NSSTVTVGGV
YTPDETSPFQ PLILTASR