| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1044 |
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| Symbol | |
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| ID | 8332379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1184188 |
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| End bp | 1184886 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644954192 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003111811 |
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| Protein GI | 256390247 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.132567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.124295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCTCA CCCACGCCAC CGCCCTCGTG ACCGGCGCCA ACCGCGGCCT CGGCCGCCAC
CTCGCGCAGC AGCTCCGCGA CAGCGGCGCC CACGTCTACG CCGCCGCCCG GAACCCCGCT
TCCATCGACC TCGAGGGGGT CACCCCGCTC GCCCTCGACG TCACTGATCC CGCCTCGGTA
GCCGCGGCGG CCAAGACCGC GACCGGCGTC TCGATCCTGG TCAACAACGC CGGTGTCGCC
ACGTTCGCGA GCCTGCTCGA CGGCGACGTC GAGGACATCC ACCGCGAGTT CGACACCAAC
TTCTTCGGCA CGCTGGCCGT CACCCGCGCC TTCGCGCCCC AGCTCGGAGC GCATGACGAG
AGCTACGTCC TCAACATCTT GTCGGTGCTC TCCTGGGTGT CGATGCCCCA CCTCGGCGGC
TACAGCGCCT CGAAGTCGGC GCAGTGGTCC CTCACCAACG CGCTGCGCCA GGAACTCGCC
GGCCAGGGCA CCAAGGTCGG CGGTCTCCAC GTCGGCTACA TGGACACCGA CATGGCGGCG
GCGGTCGAGG ACTCCAAGCT CGACCCGGCC GACGTCACCC GTCGCGCCCT CGAGGCGATC
AAGGCGGGGG AGACGGAGAT CGTCATCGAC GAGCTCAGCC GGAACGTGCG CGCCGGGCTG
TCCGGCGGTG TGGCCGCGCT GTATCCGAGC GTGGCTTGA
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| Protein sequence | MQLTHATALV TGANRGLGRH LAQQLRDSGA HVYAAARNPA SIDLEGVTPL ALDVTDPASV
AAAAKTATGV SILVNNAGVA TFASLLDGDV EDIHREFDTN FFGTLAVTRA FAPQLGAHDE
SYVLNILSVL SWVSMPHLGG YSASKSAQWS LTNALRQELA GQGTKVGGLH VGYMDTDMAA
AVEDSKLDPA DVTRRALEAI KAGETEIVID ELSRNVRAGL SGGVAALYPS VA
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