Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1041 |
Symbol | |
ID | 8332376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1182227 |
End bp | 1183006 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644954189 |
Product | methylenetetrahydrofolate reductase |
Protein accession | YP_003111808 |
Protein GI | 256390244 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.569103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0517108 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGACC ATGATTTCGA TCTGATCTGC GAGATCGAGC CGCCCACCCG CCCCGATCTG AAGCGCGTGC GGCATCAGAT CGGCGTGATG AGCCCGATCG CCGACTCGTT CCTGATCCCG GACAATCACA TCGGGCGCGC CACCGTCTCC AGCGTCGCCG TCGCCCACGA GGTCCAGGCC ATGGGCGCGA GCGGAATAGC CTGCCTGAAC TCCCGCGACA GAAACGTCCT CGGCCTCCAG CGCGACCTCC TGACCGCAGC CGCCTACGGA GTCCGCCGCT TCCTGTTCGT CTACGGCGAC AAGCCAACCT CCGGCGGCCG CACCAGCGAC CTCACCGTCC GCACCATGAT CGAGCAATCC CGAGCCGCCG CCCAAGACCC CCGCTTCCAA GGCGCCGGCC AGTTCCAAGT CGGCGTAGCC ACCGGCCTCC GCCCAATCCC CACCTGGAAG CACGAAGCCG ACTTCGCCTT CGCCCAAGTC AGCTTCTCCC TCGAAGCACT CATCCGCTGG CGCGAGAGCA TCACCCTGGA CATCCCCATC TTCGCCGGCG TCATGGTCCT GGCCAGCCCC ACAATGGCCC GCAACCTAGC AGCATCAATC CCCGACATCG ACATCCCCGA CGCCCTAGTC CAAGCAGTCG ACCAAGACCC CCAAGCCGGC GTAGAAGCAG CCTGCGACCA AGTCCTAGCC ATCCGCGCCA CCGGCGCCTT CGCCGGCGTC CACCTCGTAC CCGTCAGCCG CTACCGCCAG GTCGCGGCAC GGCTCGAGGC TGTGCTCTGA
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Protein sequence | MPDHDFDLIC EIEPPTRPDL KRVRHQIGVM SPIADSFLIP DNHIGRATVS SVAVAHEVQA MGASGIACLN SRDRNVLGLQ RDLLTAAAYG VRRFLFVYGD KPTSGGRTSD LTVRTMIEQS RAAAQDPRFQ GAGQFQVGVA TGLRPIPTWK HEADFAFAQV SFSLEALIRW RESITLDIPI FAGVMVLASP TMARNLAASI PDIDIPDALV QAVDQDPQAG VEAACDQVLA IRATGAFAGV HLVPVSRYRQ VAARLEAVL
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