Gene Caci_1041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1041 
Symbol 
ID8332376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1182227 
End bp1183006 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content67% 
IMG OID644954189 
Productmethylenetetrahydrofolate reductase 
Protein accessionYP_003111808 
Protein GI256390244 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.569103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0517108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACC ATGATTTCGA TCTGATCTGC GAGATCGAGC CGCCCACCCG CCCCGATCTG 
AAGCGCGTGC GGCATCAGAT CGGCGTGATG AGCCCGATCG CCGACTCGTT CCTGATCCCG
GACAATCACA TCGGGCGCGC CACCGTCTCC AGCGTCGCCG TCGCCCACGA GGTCCAGGCC
ATGGGCGCGA GCGGAATAGC CTGCCTGAAC TCCCGCGACA GAAACGTCCT CGGCCTCCAG
CGCGACCTCC TGACCGCAGC CGCCTACGGA GTCCGCCGCT TCCTGTTCGT CTACGGCGAC
AAGCCAACCT CCGGCGGCCG CACCAGCGAC CTCACCGTCC GCACCATGAT CGAGCAATCC
CGAGCCGCCG CCCAAGACCC CCGCTTCCAA GGCGCCGGCC AGTTCCAAGT CGGCGTAGCC
ACCGGCCTCC GCCCAATCCC CACCTGGAAG CACGAAGCCG ACTTCGCCTT CGCCCAAGTC
AGCTTCTCCC TCGAAGCACT CATCCGCTGG CGCGAGAGCA TCACCCTGGA CATCCCCATC
TTCGCCGGCG TCATGGTCCT GGCCAGCCCC ACAATGGCCC GCAACCTAGC AGCATCAATC
CCCGACATCG ACATCCCCGA CGCCCTAGTC CAAGCAGTCG ACCAAGACCC CCAAGCCGGC
GTAGAAGCAG CCTGCGACCA AGTCCTAGCC ATCCGCGCCA CCGGCGCCTT CGCCGGCGTC
CACCTCGTAC CCGTCAGCCG CTACCGCCAG GTCGCGGCAC GGCTCGAGGC TGTGCTCTGA
 
Protein sequence
MPDHDFDLIC EIEPPTRPDL KRVRHQIGVM SPIADSFLIP DNHIGRATVS SVAVAHEVQA 
MGASGIACLN SRDRNVLGLQ RDLLTAAAYG VRRFLFVYGD KPTSGGRTSD LTVRTMIEQS
RAAAQDPRFQ GAGQFQVGVA TGLRPIPTWK HEADFAFAQV SFSLEALIRW RESITLDIPI
FAGVMVLASP TMARNLAASI PDIDIPDALV QAVDQDPQAG VEAACDQVLA IRATGAFAGV
HLVPVSRYRQ VAARLEAVL