| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1034 |
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| Symbol | |
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| ID | 8332369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1171747 |
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| End bp | 1176540 |
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| Gene Length | 4794 bp |
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| Protein Length | 1597 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644954182 |
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| Product | conserved repeat domain protein |
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| Protein accession | YP_003111801 |
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| Protein GI | 256390237 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain
[TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00174457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGTGGTG GATGGAGAGC ACGGCTGGCT GTTGCGGCCG CGGCGTTGGG CGTGGTCGCG
GCGGTGGTGG TGCCGGCGGC GCATGGTGCG GACAAGACGG CGTCGCTGTC GTTGTCCAAG
CAGGTGTTCG AGCCGGGGAC GACCACGCCG GTGACCGCGC CGTTGGAGCC CGGGCAGACG
TTCGACTATT CGGTCACCGC GTCGTGTTCG GGGCTGACCG AGGGCTGCGT CAACGCCAAG
ACCGTCGATG TGATTCCGGC CGGGGTGACC ATCGAGGTTC CGCCGTCCCA GCCGCCGCTG
TACACCGTCG CGTACGACGC CGGTACCAGG ACCCTGACGG TCACCTACAC CAGTGCGCTG
CCTTCGCCGC CGAACCCGGC TGACTCGGTC GGGCTTCCGG CCGGTGCCGT GCGCGACATC
ACGATCCGCG GGTCCGTCGA CGCCGCGGAC AAGGACGGCC AGAAGGTCGT CAACACCGCG
ACGGTCACCG CGGACAACGC CGATCCGGCT GACGGCTCGA CGACCATCAC GGTGCACATC
CCGCCGGTGC TGAAGCCGGT GGCGACCAAG GTCGTCGACC CGACCTCGGT CGTGGCGCAG
TCCGGCGCCG GCGCGACGGT CACCCTCGGG GTGCAGAACC AGTCCACCGG CACTGCCGAG
GTGATGTCGC TGACCGTCGG CGACCGCACT CAGCAGACCT GGGACGACTG GGACCTGACC
GGTGTGGGTC CGGTGACGCA GTTCCCGGCG GGCGCGAACC AGGTCGCGGT CGCGGTCTGC
ACCCTTCCCA CCCCGTGCAC GGCCGCCCAG ATGGTCACCG GGCCGCCGCA GCCCGGTCCG
GCGCTGAGCC TGCCGTCGGG CGTGGACCCG GCCACCGTCA CCGGCGTCGA CTTCGTCTTC
ACCAACTCCT CCGGCACCCC GCTGGTGAAC GGCGGCTCGG CGGGCAGCGT GCAGCTGCAA
CTGAAGCTGC GCGACACGGT GCGCTCCACC GGGCAGCCGC TGAACCCGAC CACGACGCTG
ACCCGCAGCA ACTGCGCCAC GCCCTCGGCC CAGGACATGG ACCACCACAC CGCCACCGGT
GCGGACGCCT GCGCGCAGTA CTCGATCCTG TCGGCGATCC CGACGGTCGG CGGGTCCAAG
GAGTTCTTCG CCGACGCCGC CGGTACCTAC AGCCCGAACG GCTATGCCGT CGCCGGGCAG
AAGTCCGGCG TGACCGCGCT GGTGAAGGTG CAGAACACCT CCCAGTTCCC GGTGACCTCG
ATGACGCTGA CCGAGCCCTC GAGCACGTCG CCCTCGGCCC TGTCGGGGAT CGACGCGACC
AACGCCCGCC TGGTCTTCCC GCAAGGGGCG ACCTCGGCCA GCGGTGAGTT TGTGTGCGGA
GACGGGTCCA CCAAGCCGTT CACCGTGTCC CCGCCGCCCA CGACCGTGGA CATCAGCTCC
TCGGGCTGCC CCGCCGACCA ACCGCCGACC AAGGTGACCG TCACCTTCAC CGGCTCGATG
CCTCCGGGCG CGAATGCGAC GCTCGGTATC CACGGCACGC TGCGCGACAG CGTCACCGGT
GGCACGGTCC TGACCAACTG CGCCGACGGC TCCGTCAGCG GCGGACCCGG CGGTACCGCG
ACCGGCAGCG CCTGCGCGGA GCTGACCGTG GAGGACCCGC ACACCACGAT CAACGGCTCG
AAGAACACCT CCGCCCCCGA CACCGGCGGG CAGCTCGTCC CCGGCCAGCC GTACACCTAC
ATCGCGCAGG CCACGAACAA CGGCAACCTG CCGCAGACCC AGTTCACCAT CACCGACCCG
GTCGACCCCG CCGCCACCGG CGCCGACAAC CCCTTCACCT ACCTGCGGCT GACGTCGGCG
ACGATCACCA CGCAGCCGGG GAGTCTGGCC TCTGACTTCG TGCTCGAGGT CTACCAGGGC
GGAGCGTGGA AGCCTTATGA CGCCTCGGAT TCGGCGCTGC TCTCCACCGC CACCGGTGTC
CGGGCCCGCC TGGTCTCCGG TGCGGTGCAG CCGACCAACA CCGTGACCCT GAGCGTCACC
ACCACCCCGC GTGACGGCGT GCCGGCGGGC ACCACCATCA CCAACTGCAT GATCGCCGAC
GGCACCTCGG TGGACGGCAC CGGGACCTCC GGCAACATCT GCTCGGGCAC GCAGACCGTG
ACCGCGCCGG CAGCGGCCGG GCAGATCGCC AAGGACATCG TCCCCGGCAC GCTGCCGCGC
TCGCTGCCGG GCGTGCCGCC GAAGACCGCG CAGGTGAAGA TCCGCGCGGC GAACATCGGC
AACCTCCCGA TGGACCGGAT CGTCGTCACC GACCCGGACC AGGCACAGAA GGACCCGACC
GCGTTCTTCG ACAGCGTGGA CCTGGTGAGT CTGGACGGCG TCAGCTTCCC GCCGGGCGCG
GACCGGGTCC AGGTGGATGC CTGCACCAGC TTCGCGGACT GCGCCGCCGG GACCTATGTG
GCCGGCACGC CGGGCACGGC GCCCGCGCTG CCGTCCGGGG TGGCGCCGGA ATCGGTGACC
GGGCTGCGGT TCACCTTCAC CAACTCCACC GCGACCGCCG GGAAGTACCT GCTGATCCCC
GGCACCAACT ACCCGACGAG CGGGCCCTGC CCCAACGGCA CGGTCTGCTT CACCGTGGCG
CCGCGTGTGA CGCTGCGTTC CAACCCGGCG CAAGAGATCC CCGACACCGT CGTGGACATT
GCCGCCGCTG CGGGCAGCGA TGTTCTCAGC GGCGGGAACC TGGCGCCGTT CGGCAACGCC
CCGGCGCAGC TGGTGGTCAC GCCGGGCACG ATCGAGCTGG GGACGCAGAA GTCCGCGGCG
CCGACCTCGG TCGCTCCCGG CACCCCGATC CTGTACAGCT TGAAGACAAC CAATACCGGG
ACCGGCGCGG TACCGGCGCT GTTGGTGACC GAGCCGATCC CGGCGGGCCT GGTCTTCGAC
CCGACCTTCG CCGGCGACGA CGGCGAGCCG TACACGATGA CCGCGACCGT GCCGCCGGGG
ACCCCGCCGA TGCCCACGCC GGTCTTCACC GCGACCGCCG ATCCGGCCAC GCACGCCGTG
ACCTCGCTGA CGTGGCAGTT CCCCGCCGAC TTCCAGTTCC TGCCCGGATC GGTGGTCACG
CTGTCTTTCC AGGCGACGCT CGCCGCCGGC ACGCCCGCCA ACACGGTCGT GGACAACACG
TTCGGGGCGG GCACGTCCGA CACCGCCAGT CGCAGCAAGC TGACATGCCA GGGCGGCGCG
ACCCCCGACC CGGCGCTCGG CTGCACTGCC ACCGCGCAGG TGACCACCCG CTCCGGCAAC
GCGTTGGACT CGCAGAAGTG GGTGCACGGC GACGACGCGC TCGGGTTCGT CAACGTCCGC
ACCAACAAGT CGGTTCCGGT CGGTGACGCC GACTGCCCGC TGCTGACCGT CGCAGGGAAC
TCATACACTC GCTACCCCTG CGTGGCGCGC ATCTTGGCTG GGCAGCGCTT CGACTTCGTG
CTCGCCTTCA CCAACGTCGG CACGACGGAC GCCACGCAGA CACGCGTCGT GGACGACCTG
CCGAAGCTGG GGGACAAGGG CGTGATCGTC CCCGGCGGCC GGGGCACCCA ATGGGCGCCG
CGTCCGACGT TGGCTGCCGC ACCGAGCCTG GCTGCCGGCA AGCCCGGCAC GCTGACCTCC
GCCTACGCGC CGAGTTCTCC CGGCTGCACC TTGGACCTAG CACCGGCGCC TTCGGCGTGC
CCGGCCGGGG CGTGGAACAC ACCGTTCGAC GCGAACGCCG AATCGCTGCG GGAGTACATC
GGATTCTCTC CGGCGCTGCC GCCGGGCGGC TCGACGCTGC TGCACGTCCC GATGACAGCT
CCGGCCGATC TCACCGGTCC GGGGGAGAAC CCGGTGGCGT GGAACTCCTT CGGCCACACC
GATTTCTTCA CCACCGGCGA GACCACCACG CAGCTGCCCG CGGTCGAGCC GATCAAGGTC
GGGATCGCCA TGCCCTTCGG CGACCTGGCC ATCACCAAAT CGGTCCAAGG GGCACTGCCG
CCCGGATCGA AGGTCGGGCC GTTCACCGTC GACTACGACT GCGTCGTCCA CACCGCCGAC
GGCGCGACGG TGACGGTCGC CTCCGGCAGC GGCAAGATCG CCGACGGGCA GACCCTCAGT
CGCAGGCACA TCCCGGCCGG AGCGGTGTGC ACGGTCACCG AGACCGACGC CGCGGGCGGG
CGGACGAGCC CGGTCGCGCC GGTGACCATC CCGGCCGGCG ACGGCGTCAC ACCCACCTCG
ACCAGCGTGA CCGTGACGAA CACCTTCGCG GCACCGCGGC TGATCGTGGT CAAGCATGTG
ACCGGATCGG GCGCGCCGGC CGGCGCGACG TTCACCGTGG ATGTGAACTG CCTCCTCGAC
GGCAAGCCGG TGTCCGGGTA TCCGCGAACC CTGACACTGA CCGCCGATCA GCCGATCGTG
CTCACGGACG TCCCGGTCGG CGCGACCTGC ACCGCGCGCG AGACCGACGC CCAAGGCGCG
GCCAGAACCA CGATCGCCTA CTCCGACGGC TCGGACGCGG TGATCCGGGT CGACAAGGAC
GCGACGATCA CGGTGACGAA CAAGTTCGTT CCGCCGCCCA CGCCGCCGAC TCCTCCGACC
CCTCCGACGC CGCCCACCCC GGCTCCGGCG CCGCATCACC ACCCGAAGCA CCACCTGCCG
GCCACCGGCG CCGACGTGGT GCTGCCCGCC GCCGTCGCCA TCGCGCTCGC CCTCGCCGGC
GCGGTCCTGC TGATGGCTGC GCGTGATCGA CGTCGGGGAC GGCGCGGCGC GTAG
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| Protein sequence | MRGGWRARLA VAAAALGVVA AVVVPAAHGA DKTASLSLSK QVFEPGTTTP VTAPLEPGQT
FDYSVTASCS GLTEGCVNAK TVDVIPAGVT IEVPPSQPPL YTVAYDAGTR TLTVTYTSAL
PSPPNPADSV GLPAGAVRDI TIRGSVDAAD KDGQKVVNTA TVTADNADPA DGSTTITVHI
PPVLKPVATK VVDPTSVVAQ SGAGATVTLG VQNQSTGTAE VMSLTVGDRT QQTWDDWDLT
GVGPVTQFPA GANQVAVAVC TLPTPCTAAQ MVTGPPQPGP ALSLPSGVDP ATVTGVDFVF
TNSSGTPLVN GGSAGSVQLQ LKLRDTVRST GQPLNPTTTL TRSNCATPSA QDMDHHTATG
ADACAQYSIL SAIPTVGGSK EFFADAAGTY SPNGYAVAGQ KSGVTALVKV QNTSQFPVTS
MTLTEPSSTS PSALSGIDAT NARLVFPQGA TSASGEFVCG DGSTKPFTVS PPPTTVDISS
SGCPADQPPT KVTVTFTGSM PPGANATLGI HGTLRDSVTG GTVLTNCADG SVSGGPGGTA
TGSACAELTV EDPHTTINGS KNTSAPDTGG QLVPGQPYTY IAQATNNGNL PQTQFTITDP
VDPAATGADN PFTYLRLTSA TITTQPGSLA SDFVLEVYQG GAWKPYDASD SALLSTATGV
RARLVSGAVQ PTNTVTLSVT TTPRDGVPAG TTITNCMIAD GTSVDGTGTS GNICSGTQTV
TAPAAAGQIA KDIVPGTLPR SLPGVPPKTA QVKIRAANIG NLPMDRIVVT DPDQAQKDPT
AFFDSVDLVS LDGVSFPPGA DRVQVDACTS FADCAAGTYV AGTPGTAPAL PSGVAPESVT
GLRFTFTNST ATAGKYLLIP GTNYPTSGPC PNGTVCFTVA PRVTLRSNPA QEIPDTVVDI
AAAAGSDVLS GGNLAPFGNA PAQLVVTPGT IELGTQKSAA PTSVAPGTPI LYSLKTTNTG
TGAVPALLVT EPIPAGLVFD PTFAGDDGEP YTMTATVPPG TPPMPTPVFT ATADPATHAV
TSLTWQFPAD FQFLPGSVVT LSFQATLAAG TPANTVVDNT FGAGTSDTAS RSKLTCQGGA
TPDPALGCTA TAQVTTRSGN ALDSQKWVHG DDALGFVNVR TNKSVPVGDA DCPLLTVAGN
SYTRYPCVAR ILAGQRFDFV LAFTNVGTTD ATQTRVVDDL PKLGDKGVIV PGGRGTQWAP
RPTLAAAPSL AAGKPGTLTS AYAPSSPGCT LDLAPAPSAC PAGAWNTPFD ANAESLREYI
GFSPALPPGG STLLHVPMTA PADLTGPGEN PVAWNSFGHT DFFTTGETTT QLPAVEPIKV
GIAMPFGDLA ITKSVQGALP PGSKVGPFTV DYDCVVHTAD GATVTVASGS GKIADGQTLS
RRHIPAGAVC TVTETDAAGG RTSPVAPVTI PAGDGVTPTS TSVTVTNTFA APRLIVVKHV
TGSGAPAGAT FTVDVNCLLD GKPVSGYPRT LTLTADQPIV LTDVPVGATC TARETDAQGA
ARTTIAYSDG SDAVIRVDKD ATITVTNKFV PPPTPPTPPT PPTPPTPAPA PHHHPKHHLP
ATGADVVLPA AVAIALALAG AVLLMAARDR RRGRRGA
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