Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1033 |
Symbol | |
ID | 8332368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1170399 |
End bp | 1171610 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644954181 |
Product | histidine kinase |
Protein accession | YP_003111800 |
Protein GI | 256390236 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0113351 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTTA CGTCGTCGGC GCGATCCTCA GGACACAGGC TCGCGAATCC GGGAAGAGTC TCGAAGCTGT CCATCCGGGC CCTACTGGCT CTCGTCCAGG GCGCGCTCGC GGTGCTCGCC TGCGTGCTTC TCCTAGCGAT CACCTATGTC TTGTTCGATC GGCAACTGCC GTCGAACCCG GTGCTCAAGG CAGACGTCAC CATCGCCGTT CAGGATCCGG TGCCTCGGCC GGATCCCTCA CTGGGCCGCC AGGCGGGATC GTTCCTGTCG AAGGACGCGG TGCTCGATCA GCTGCTCGTC CAAGGCGGGC TCGCCCTGGG CGCGGTCGCC GTCGCCGCCA CCGGCCTGGC CTGGCTCACG GCCGGACGCA TGCTGCGTCC CCTCCACCGG ATCACCGCCA CGGCCGGCCG GATCGCGGGC GCTCCCGCCG CCGACCGCGG ACTGCACGAA CGCATCGCCC TGAACGGCCC GGCCGACGAG GTCAAGGAAC TCGCCGACAC CTTCGATCTC ATGCTGTCCC GCCTCGACCA GTCCTTCGAC AGCCAGCGGC GGTTCATCGG CAACGCCTCG CACGAACTGC GTACTCCGCT CGGCCTCAAC CAGGCGCTGA TCGAACTCGC TCTTCAACGC ACTGATACGA CGCCTGAGAT GCGCCGCCTC GGGGAGACGC TCCTCGAGGT CAACTCCCGC CACGAGCGGC TCATCGACGG CCTGCTGGTG CTCGCCAGAT CGGAGGGCGA GCCGGGGCAG GGCTCCTTCG TGGACCTCGC GGACATCGCC GAGCACGTCG TGGAGCAGAC TCCCGCAGGT GACGTCGAAG TCACGTGCGC GGTCGAGGAG GCACCCGCGA TCGGGAATCC GGTCCTGCTG GAGCGACTCG TCCAGAACCT CGTCGAGAAC GGCATCCGGT ACAACATCCG GCACCGCGGC TGGGTCCGCG TCACCACCGG CACCGCAGCG GACGGATCAA CCCGGCTCCA GGTGAGCAAC ACCGGCCCGA TCGTTCCCCG GCACGAGATC CCGACCCTGT TCGAGCCCTT CCGCCGCCTC GGCGGCGAAC GGCCGTCCGG AAGGTCTCAC GGCACATCAG GCGCGGGTCT GGGCCTGTCG ATCGTCCGCG CCGTCTCCCG CGCGCACGGC GGCGACGTCC AAGCCGAGCC TCGGGACGGC GGAGGTCTGA TCGTCACGGT GACTCTGCCG CGAGCGGAGT AG
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Protein sequence | MSLTSSARSS GHRLANPGRV SKLSIRALLA LVQGALAVLA CVLLLAITYV LFDRQLPSNP VLKADVTIAV QDPVPRPDPS LGRQAGSFLS KDAVLDQLLV QGGLALGAVA VAATGLAWLT AGRMLRPLHR ITATAGRIAG APAADRGLHE RIALNGPADE VKELADTFDL MLSRLDQSFD SQRRFIGNAS HELRTPLGLN QALIELALQR TDTTPEMRRL GETLLEVNSR HERLIDGLLV LARSEGEPGQ GSFVDLADIA EHVVEQTPAG DVEVTCAVEE APAIGNPVLL ERLVQNLVEN GIRYNIRHRG WVRVTTGTAA DGSTRLQVSN TGPIVPRHEI PTLFEPFRRL GGERPSGRSH GTSGAGLGLS IVRAVSRAHG GDVQAEPRDG GGLIVTVTLP RAE
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