Gene Caci_1031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1031 
Symbol 
ID8332366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1169051 
End bp1169602 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content69% 
IMG OID644954179 
Producthypothetical protein 
Protein accessionYP_003111798 
Protein GI256390234 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00774423 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGAATCA GCACGTTTCT CATCCCGGTC GCCTTAGCGG CCGCGATGAC CGCAGGCTGC 
TCGGCATCCG CCAAACCGGC CGTGGCCACA GCGAACGCCG CCCCGGCCAA AGCAGCGGCC
ACCACGGCTG GCAGCACGGC AGGCAGCACG GCGGCCTTCG GGAAATGCAT GCGCGCGAAC
GGCGTCGACA TGCCGGATCC GAAGGACTCC CAGACCCTCA TCGCGCAGGG AAGCGGCGTG
AACCCCGACT CACCGGTGTT CAAGAAGGCG ATGACGGCCT GCACACAGTA CCTCCCCAAC
GGAGGCCAGC CGCCGGCGCA GGACCCGGCG GTCACCGCGC AGATGCTGAA GTTCGCGAAG
TGCATGCGAG ACCACGGGGT CGCCATGCCG GACCCCTCCG CGAACGGCTC TTCGATGATC
CAGCAGGGCT CCGGCATCGA CCCGACCGAC CCGAAGTTCA AGGCCGCGCA AACCGCCTGC
CAGTCCCTGC TGCCCAACGG CATGGTGCAG GGCGGCCAGG TGCATGCGGG CCAGGGCGCG
GGCAACCCGT GA
 
Protein sequence
MRISTFLIPV ALAAAMTAGC SASAKPAVAT ANAAPAKAAA TTAGSTAGST AAFGKCMRAN 
GVDMPDPKDS QTLIAQGSGV NPDSPVFKKA MTACTQYLPN GGQPPAQDPA VTAQMLKFAK
CMRDHGVAMP DPSANGSSMI QQGSGIDPTD PKFKAAQTAC QSLLPNGMVQ GGQVHAGQGA
GNP