| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1028 |
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| Symbol | |
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| ID | 8332363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1165761 |
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| End bp | 1167002 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644954176 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003111795 |
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| Protein GI | 256390231 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.132766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCGCG GCGAAGCACC TGGCGAGTCC GCGGCCACGG CCGACCGCAA GCGCCCGAAG
CCGTCCCGAC TCGGGGTCGG CGACATCGCG CGGGTCGGCG CCGGCGGTCT GCGCACGCGG
CCGGTCCGAG CCTTCCTGTC GGCCCTCGGC ATCGGAATCG GGATATCGGC GATGATCGCC
GTCGTCGGGA TCTCTACGTC CGGCCAGGCA GACCTCAACC GGCGACTGGC AGCGATCGGC
ACCAACCTGC TGCGGGTGGC ACCAGGCCAG ACGCTGTTCG GCGGGACGAC CCACCTGCCG
ACCGAGTCCA TCGGAATGAT CGCCCGGATC GGCCCGGTCA CCTCGGTCTC GGCGATCGGC
ACCGTCACCG CGAACGTCTA TCGAAGCAGC CTGATCCCGT CTGGACAGAC CGGCGCTATC
ACCGTCGAGG CCGCACGCAC CGACCTGCTT CCGACCGTGG GCGCCACGGT CGCGTCCGGA
ACCTGGCTCA GCGCGGCGAC CTCGAAGTAC CCGGCGGTCG TCCTGGGCGC TGCGGCGGCG
CGACTGCTCG GCGTCGGCGC CGCCTCCCCC GGCACTCAAG TCTGGCTCGG CGGCTCCTCC
TACACCGTCG TCGGCATCCT GAACCCGGTT CCCCTGGCGC CGGAGCTGGA CACCGCCGCC
ATGGTCGGCT GGCCGCAGGC CGCATCAGCC CTCGGGTTCG ACGGCCACCC GACCACCGTC
TACACCCGCA CCCGCGACGA TTCCGTGGCG AGCGTCCAGG CGATACTCGG CGCGACCGCC
AACCCGGAGC ACCCGGACGA GGTGAAGGTC TCCCGGCCGT CCGACGCTCT GGCGGCGAAG
CAGGCGGCGA ACAGCGCCGT CAGCGGGCTG CTGCTCGGCC TCGGCGCGGT CGCGCTGCTC
GTCGGCGGGA TCGGCGTCGC CAACACCATG GTCATCTCAG TGCTCGAACG ACGCGCCGAG
ATCGGACTCC GGCGGTCGCT GGGTGCCACG CGCGGCCAGA TCCGGTCGCA GTTCCTCGCC
GAATCGCTCC TGCTGTCGGC TCTAGGCGGG GTCGGCGGCG TCGCGGTCGG CATCGCGGTC
ACCGCCGGCT ACGCGTCGTT CAAAGGCTGG CCCTCGGTCG TCCCGGCCTG GGTGAGCACC
GGAGGCGTCG CCGCGACCGT CGTCATCGGC GGCTTCGCGG GGCTGTATCC GGCCTGGCGG
GCGGCGCGCA TGTCGCCGAC CGAGGCCCTG TCAGTCCCCT GA
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| Protein sequence | MKRGEAPGES AATADRKRPK PSRLGVGDIA RVGAGGLRTR PVRAFLSALG IGIGISAMIA
VVGISTSGQA DLNRRLAAIG TNLLRVAPGQ TLFGGTTHLP TESIGMIARI GPVTSVSAIG
TVTANVYRSS LIPSGQTGAI TVEAARTDLL PTVGATVASG TWLSAATSKY PAVVLGAAAA
RLLGVGAASP GTQVWLGGSS YTVVGILNPV PLAPELDTAA MVGWPQAASA LGFDGHPTTV
YTRTRDDSVA SVQAILGATA NPEHPDEVKV SRPSDALAAK QAANSAVSGL LLGLGAVALL
VGGIGVANTM VISVLERRAE IGLRRSLGAT RGQIRSQFLA ESLLLSALGG VGGVAVGIAV
TAGYASFKGW PSVVPAWVST GGVAATVVIG GFAGLYPAWR AARMSPTEAL SVP
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