Gene Caci_1024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1024 
Symbol 
ID8332359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1162706 
End bp1163167 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content61% 
IMG OID644954174 
Producthypothetical protein 
Protein accessionYP_003111793 
Protein GI256390229 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.1166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.043533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA CAAAGGGGCA TAACGGGCAG GTACAGTTCG ACGGCGAGTT CGTCACAATC 
GCCCGAAAGG GCTTTCTCGC GCGCAGTAGC GTAGGCAAGG GTGTCAAGCG AATCCACCTA
TCGCAGATCG CTGCGGTTCA GTGGAAGCCC GCCGGATTCG CGGTGAACGG GTTCATTCGT
TTCACTGTGC CAGGTGGAAT CGAAACCCGT GCGCGATTCG GCTCGCGGAC TACTTCCGCG
GCGAAGGACG AGAACTCGGT GATCTTCACT CAGAAGCAGC AGCCTGCGTT CGCAGAGCTT
CGTGACGCTG TCGAGAGCGC GATCGCAGCT AGGGGCCAAG TCGCGGCGCC GACGTCTGCG
GGGATGGTTG CCGATGAGCT GGCGAAACTT CAGGGCTTAC TTGACCAGGG CGTCCTGAGC
CCGGAGGAGT TCAGCCAGCA GAAGGCACGC CTGCTGGGAT AA
 
Protein sequence
MIETKGHNGQ VQFDGEFVTI ARKGFLARSS VGKGVKRIHL SQIAAVQWKP AGFAVNGFIR 
FTVPGGIETR ARFGSRTTSA AKDENSVIFT QKQQPAFAEL RDAVESAIAA RGQVAAPTSA
GMVADELAKL QGLLDQGVLS PEEFSQQKAR LLG