Gene Caci_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1015 
Symbol 
ID8332349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1155402 
End bp1155890 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content66% 
IMG OID644954164 
ProductGlutathione peroxidase 
Protein accessionYP_003111784 
Protein GI256390220 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0150707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTT ACGACATCCC GATCAACACC CTCGACGGCA AGCCGGCCTC GCTGAAGGAC 
TACGAGGGCA AGACCGTCCT GCTCGTCAAC GTCGCCTCGC GCTGCGGCCT CACGCCGCAG
TACGAAGGTC TGGAGCGGCT GCACGAGCGG TTCGCGGACC GCGGCTTCAC CGTCGTCGGC
GTTCCGTGCA ACCAGTTCGG CGGCCAGGAG CCGGGTACCT CCGAGGAGAT CCAGGAGTTC
TGCTCGGCGA CCTACGGCGT GACCTTCCCG CTCACCGAGA AGATCGACGT CAACGGCGAC
GAGCGCCACG CCCTTTACAC CGAGCTCACC AAGGCGACCG ACGCCGAGGG CGGCAACGGC
GACATCCAGT GGAACTTTGA AAAGTTCTTG ATCGGCTCCG ACGGAACGGT GCTCAAGCGC
TTCCGTCCGC GCACCGAGCC CGAGGCCGCC GAAGTGGTCG AGGCCATCGA GGCGGCGCTC
CCGGCTTAG
 
Protein sequence
MSLYDIPINT LDGKPASLKD YEGKTVLLVN VASRCGLTPQ YEGLERLHER FADRGFTVVG 
VPCNQFGGQE PGTSEEIQEF CSATYGVTFP LTEKIDVNGD ERHALYTELT KATDAEGGNG
DIQWNFEKFL IGSDGTVLKR FRPRTEPEAA EVVEAIEAAL PA