Gene Caci_1009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1009 
Symbol 
ID8332343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1148708 
End bp1149190 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content72% 
IMG OID644954158 
Producttranscription factor WhiB 
Protein accessionYP_003111778 
Protein GI256390214 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.1595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACG TGTCCCGTCT CCCGGGCCCG AACGCGGACT TCTGGGACTG GCAGTTGCGC 
GGCTCCTGCC GCGGCACCGA CAGCGACCTG TTCTTCCACC CGGAAGGCGA ACGGGGCCAG
GCGCGGACCT CCCGAGAGGA GGCCGCCAAG GAGGTGTGTC TGCACTGCCC GGTATGCAAA
CCGTGCCGTG AGCACGCCCT GCGGGTCCAC GAGCCCTACG GGGTGTGGGG CGGCATGACC
GAGGAAGAAC GCGACGAGTC CTACGCGCGG GAGAAGTCCG CGGCGCGCGC GGCCAAGCTG
GCGGCGCTGG CGGCGGCGAA GAACACCAAG CCGGCGCGCA AGCCGTCGAC GAAGGTGCCG
GTGAAGCTGC AGGCGAAGCC CAACGGCGCG CCGGCGACGG CGCCCAGCAA CGGGATGACC
ATGACGCGGC CGGCGAACGC GGTGTCGGCC GGGGTGCGGG CCAAGGCGAA GAGCAAGCCG
TAG
 
Protein sequence
MADVSRLPGP NADFWDWQLR GSCRGTDSDL FFHPEGERGQ ARTSREEAAK EVCLHCPVCK 
PCREHALRVH EPYGVWGGMT EEERDESYAR EKSAARAAKL AALAAAKNTK PARKPSTKVP
VKLQAKPNGA PATAPSNGMT MTRPANAVSA GVRAKAKSKP