Gene Caci_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1001 
Symbol 
ID8332335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1142448 
End bp1142930 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content68% 
IMG OID644954150 
Productribosomal-protein-alanine acetyltransferase 
Protein accessionYP_003111770 
Protein GI256390206 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID[TIGR01575] ribosomal-protein-alanine acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.794333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.157303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGA CGCTGCGTCC GTTCCGCTGG TGGGACATCG AAACGGTGCG ACGGATCGAG 
GAGGACCTGT TCCCCGAGGA CCCCTGGTCC GTGGAGATGT TCTGGTCCGA ACTCGCGGAC
GTCCCGCACT CCCGCTACTA CGTCATCGCC GAAGCGGAAG CCGGATCCGA ATCCGAGATC
GCCGGCTACG CGGGCTTGAT GGCCCAGCCC GGATCCGACG CGGGCACGGT CGAGGGCTGG
ATCCAGAACA TCGCGGTGGC CCGCGCGCAC CAGGGCCGGG GACTCGGGGC GGTCCTCTTG
GAGGCGCTTC TGGACGAGGC ACTGCGCAGG AAATGCGTAG AGGTCTGGCT GGAAGTGCGC
ACAGACAACG ACTCCGCGCA GCGCCTGTAC ATCCGCCACG GCTTCGAACC CGCCGGCATC
CGCCGCGGCT ACTACCAGCC CGGCAACCAC GACGCGCTGA TCATGAGGAA GGCACTGGCG
TGA
 
Protein sequence
MAPTLRPFRW WDIETVRRIE EDLFPEDPWS VEMFWSELAD VPHSRYYVIA EAEAGSESEI 
AGYAGLMAQP GSDAGTVEGW IQNIAVARAH QGRGLGAVLL EALLDEALRR KCVEVWLEVR
TDNDSAQRLY IRHGFEPAGI RRGYYQPGNH DALIMRKALA