| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0999 |
|---|
| Symbol | |
|---|
| ID | 8332333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 1141111 |
|---|
| End bp | 1141740 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644954148 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003111768 |
|---|
| Protein GI | 256390204 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.150929 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCC AGCAGCAGAA CGCCCCGCGG TCACCGGCGC GGGTGAAGCG CGGGCGTGTG
AGCCCCATGG CGACGGTCGC CGCGATCACG GCCGCGGCCC TGGTCGGGGT GGGCGTGCTG
GCCGTCCAGG CCAACGGTTC GGCGCCGAAC AAGGCGCCCT CGGCGGTCGC GGCGAAACAG
CAGCCGCCGG TCTCGACGAA CCAGGTCGGG CAGCCGGTCT CCCCCGCTCC GGATCCGGCG
CTGGCGCTTC CCGCCTCCAG CGGCACCGGC AAGCGCATGG TGTACAGCCT GTCCAAGGCG
CGGATCTGGC TGGTCGGCGC CGATGAGAAG GTCCAGATGT CGGCGGCGGT GGTGCCGAGC
ACGGTGATTC CGGCGGCCGG GACCTACGCG GTGTCCAAGC GGATCGCCAA CAACCAGTCC
GCCGACCGCG TCGCCGTGCA GTACGAGGTG CTGTGGGGAC CGAAGGGCGA CACCACGAAG
TTCGCCATGG AGGCGGTCTC GTCGCTGCCG GGCGACCAGA TGCCGATGAA GCCCGAGGCG
AAGACCGGCG GGGTGCGGCT GACGCAGAAC GACGCGCTGG CGGTGTGGCA GTTCGCGGTG
CTGCAGACGC CGGTTGTCGT GGTGGCTTAG
|
|---|
| Protein sequence | MTSQQQNAPR SPARVKRGRV SPMATVAAIT AAALVGVGVL AVQANGSAPN KAPSAVAAKQ
QPPVSTNQVG QPVSPAPDPA LALPASSGTG KRMVYSLSKA RIWLVGADEK VQMSAAVVPS
TVIPAAGTYA VSKRIANNQS ADRVAVQYEV LWGPKGDTTK FAMEAVSSLP GDQMPMKPEA
KTGGVRLTQN DALAVWQFAV LQTPVVVVA
|
|---|
| |